Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1971 ATGGAAGAGGAGAATGTTAAACAGCCATTGTTGGAGAAGAAGAAGAAGAAGTACTACGAGAACTGCCCTGGTTGTAAAGTGGATAAAGAGAAAGAGTTGAGTGAGGGACAAGGTGTACCCTTCACAAAGCTTTTCATCGTGTGGATGCTCGTGCTTTGTGCTGCATTGCCAATATCATCTCTCTTTCCATTCCTTTATTTCATGGTAAGGGATTTTAATATTGCGAAAACAGAAGCTGATATTAGTTCTTATTCTGGTTATGTGGGTTCTGCATTTATGCTTGGCAGATGTTTGACATCTTTATTGTGGGGAACTATAGCTGATCGCATTGGTCGAAAACCTGTTATAATTATTGGAATTATTTCAGTCATCATTTTCAACACACTATTTGGCCTTAGCACAAGTTTTTGGATGGCTGTTATCATGAGGTTTCTTCTGGGAAGTTTAAATTGTTTGTTTGGACCAGTGAAGGCCTATACAACTGAACTTTTTCGAGAAGAACACCAAGCTCTTGGACTCTCAACCGTAAGTGCAGCTTGGGGCATAGGTTTAATAATTGGCCCAGCATTGGGAGGCTATTTGTCTCAGCCAGTAGAAAAGTACCCTCATATATTTCCAAAGGATAGCTTTTGGGATAAGTTTCCATACTTCTTACCCAACATTGTAATATCAACATTTGCATTTGTAGTAGCAATTGGCTGCATCTGGATTCCGGAAACACTTCACAACCACAATTGTAGCGATGAATACACAGAAGATGCCAAAGCTTTAGAAAATGGAAACAGTGGGGCTGGCATTGAAAATATTCAGAAAAACGAAAACCTCTTCCTTAATTGGCCCTTAATGTCATCCATCATTTCATATTGCATTTTCTCACTTCATGATATTGCTTATCTAGAGGTTTTCTCCTTATGGGCTGTTAGTCCTCAAAGGCTTGGGGGTTTAAACTTTACAACTGATGATGTTGGTAATGTTCTTTCAATATCAGGTCTTGCACTTATCATTTACCAACTTACCATATATCCATCTGTGGAAAAAACTAGTGGACCTATTTCGCTTGCCCGCATCTCATCTATTTTGTCCATACCTCTTTTGCAAAGCTACCCCTTCATAGCATTGTTGTCAGGCTTAGCACTATACATAGTGTTAAGTATTTTTTCAATTCTAAAGAATATTCTGTCTATCACCATTATAACCGGTTTGCTCCTTCTACAAAACCGAGCAGTGGAACAACACCAAAGAGGTGCAGCTAATGGAGTTGCTTTGACATGCATGTCTCTATTCAGTGCTATTGGCCCTGCTACTGGTGGTACATTATTAACTTGGTCACAAAAGAGGATGGATGCTTCATTCCTCCCAGGCACACATATGGTGTTCTTTGTCCTGAACATAATTCAAGCATTTGGATTACTCATGATGTTCAAACCATTCCTTGTTGAAAAAAAGAAAATGCACACAGATCAGTTACACTGA 1473 0.391 MEEENVKQPLLEKKKKKYYENCPGCKVDKEKELSEGQGVPFTKLFIVWMLVLCAALPISSLFPFLYFMVRDFNIAKTEADISSYSGYVGSAFMLGRCLTSLLWGTIADRIGRKPVIIIGIISVIIFNTLFGLSTSFWMAVIMRFLLGSLNCLFGPVKAYTTELFREEHQALGLSTVSAAWGIGLIIGPALGGYLSQPVEKYPHIFPKDSFWDKFPYFLPNIVISTFAFVVAIGCIWIPETLHNHNCSDEYTEDAKALENGNSGAGIENIQKNENLFLNWPLMSSIISYCIFSLHDIAYLEVFSLWAVSPQRLGGLNFTTDDVGNVLSISGLALIIYQLTIYPSVEKTSGPISLARISSILSIPLLQSYPFIALLSGLALYIVLSIFSILKNILSITIITGLLLLQNRAVEQHQRGAANGVALTCMSLFSAIGPATGGTLLTWSQKRMDASFLPGTHMVFFVLNIIQAFGLLMMFKPFLVEKKKMHTDQLH* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1971 490 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 1 488 - -
Pvu11g1971 490 Gene3D MFS general substrate transporter like domains 42 474 IPR036259 -
Pvu11g1971 490 PRINTS Tetracycline resistance protein signature 116 140 IPR001958 GO:0022857
Pvu11g1971 490 PRINTS Tetracycline resistance protein signature 173 195 IPR001958 GO:0022857
Pvu11g1971 490 PANTHER MAJOR FACILITATOR SUPERFAMILY-RELATED 1 488 - -
Pvu11g1971 490 SUPERFAMILY MFS general substrate transporter 44 482 IPR036259 -
Pvu11g1971 490 ProSiteProfiles Major facilitator superfamily (MFS) profile. 43 481 IPR020846 GO:0022857
Pvu11g1971 490 Pfam Major Facilitator Superfamily 47 433 IPR011701 GO:0022857|GO:0055085
Pvu11g1971 490 CDD MFS_SLC46_TetA_like 47 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1971 Pvu-Chr11 46625566 46631485 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1971 11 46625566 46631485 Pvu11g1971 11 46625566 46631485 ECH
Pvu5g0133 5 1050387 1055579 Pvu11g1971 11 46625566 46631485 PCT