Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1960 ATGGACAACGAATTTGAGGATAGACAAGAAGAAACAGTTTCAGATATCATACCAAGCAATCAGCAGAGGAAAAAGCAGTCGTTTCTGTGGAAAGTTTTGGCCATGAGAGAGAGAAACGGAAGGACAATGGAGAGAGGTTCAAATTATTCCCTTGATACACTTTCTGATCCATCCATTGAAAATCGAGGCTCAGAACCTTCTATGTCTTCTACCGAAGCAGTTCAAAATCTCAGAGTTTTTGCAGCAACATGGAATGTGGGAGGGCAATGCCCCACTATGAACCTTGATCTGAGTGATTTTCTTCAGGTTCGAAATGACCCAGATATGTATGTTTTGGGCTTTCAGGAGATTGTCCCTTTAAATGCTGGAAATGTGCTGGTATTAGAGGATAATGAGCCTGCTGCAAAATGGCTCGCTTTAATCAATCAATCACTCAATGGTCCTTCAGATTTGGCTCCCAACGGACTAAAACAGACTGCATCTTTTGGTGGACCATTGTTCTTCCAAAAGCCTTCTTTGAAGAAGATTAAGAAAACTTTCAAAAAATTAAATGGAAAGAGGCTAAAAAGTTGTAACTGTGTTCTTGAAATGGAAAGGAAGGCTGCAAAGGATTTCTGTTTTCGCTGTCAAGAATCAAACTTCAATTCAGATGATTCTTCCACCGAAGAAGAGGATGATAATTTCCCAATTCCTGTTTCCTTGGCTACTACTCAGATGAAATACAGCCTTGTTACATGCAAGCAAATGGTTGGAATTTTTGTAAGTGTCTGGATGAAGAGGGAACTTGTTCAGTATGTAGGCCATCTGAGAATATGTTGCACTAGCCGCGGGATCATGGGTTGCCTTGGGAACAAGGGGTGTATATCAGTGAGCATGTCTTTTTATCAGACAAGTTTTTGCTTTATCTGTAGTCATTTGGCATCTGGAGAGAAAGAGGGTGACGAGCTTCGCAGGAATCTTGATGTCATAGAGATTCTGAAGAACACTCAGTTTCCAAGGATTTGCAAGACACCAAATAGTAGGATGCCTGATAGAATCTTAGACCATGACCGAATCATATGGTTTGGGGACTTGAATTACAGAATTTCTTTGAGCCATGATGATGCAAAAAGGCTTGTGGAAAAGAGGGATTGGCCTTCTCTTTTTAACAAGGATCAGCTTAAAATGGAAAGGGAAGCAGGTCGTGTATTCAAGGGGTGGAAAGAAGGGAAAATCTACTTTGCACCTACATACAAATATGCCTTTAACTCAGACACTTACTATGTTGAAGGTGTAATAAAAGTTTCAAAGCACAAAAGGAGAACCCCAGCTTGGTGCGACAGAATCTTGTGGCATGGAAGGGGAATCCATCAACTTTCATACGTCCGCAAGGAATTTAAGTTCTCAGACCATCGACCTGTTTGTTCAACATTTAATGTAGAAGTTGAGGTTATGTTCAGGGGACAGAAGAAGAAAGTTTCAACTTATAACTTTCAGAACATTGATGATGATCTTGTATCCACAAGAAGTTCATATTATTCTTGA 1524 0.4022 MDNEFEDRQEETVSDIIPSNQQRKKQSFLWKVLAMRERNGRTMERGSNYSLDTLSDPSIENRGSEPSMSSTEAVQNLRVFAATWNVGGQCPTMNLDLSDFLQVRNDPDMYVLGFQEIVPLNAGNVLVLEDNEPAAKWLALINQSLNGPSDLAPNGLKQTASFGGPLFFQKPSLKKIKKTFKKLNGKRLKSCNCVLEMERKAAKDFCFRCQESNFNSDDSSTEEEDDNFPIPVSLATTQMKYSLVTCKQMVGIFVSVWMKRELVQYVGHLRICCTSRGIMGCLGNKGCISVSMSFYQTSFCFICSHLASGEKEGDELRRNLDVIEILKNTQFPRICKTPNSRMPDRILDHDRIIWFGDLNYRISLSHDDAKRLVEKRDWPSLFNKDQLKMEREAGRVFKGWKEGKIYFAPTYKYAFNSDTYYVEGVIKVSKHKRRTPAWCDRILWHGRGIHQLSYVRKEFKFSDHRPVCSTFNVEVEVMFRGQKKKVSTYNFQNIDDDLVSTRSSYYS* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1960 507 MobiDBLite consensus disorder prediction 1 24 - -
Pvu11g1960 507 MobiDBLite consensus disorder prediction 44 70 - -
Pvu11g1960 507 SUPERFAMILY DNase I-like 69 485 IPR036691 -
Pvu11g1960 507 SMART i5p_5 75 479 IPR000300 GO:0016791|GO:0046856
Pvu11g1960 507 Gene3D Endonuclease/exonuclease/phosphatase 57 504 IPR036691 -
Pvu11g1960 507 Pfam Endonuclease/Exonuclease/phosphatase family 82 464 IPR005135 GO:0003824
Pvu11g1960 507 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 70 488 IPR045849 GO:0004445|GO:0046855
Pvu11g1960 507 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 10 70 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1960 Pvu-Chr11 46528463 46534429 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1960 247 485 Acyl Lipid Metabolism Gene Families AT2G43900 27.957 3.41e-28 117