Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1952 ATGTTGGAACTACCATTGAACATGGCTCTTCGATTCCCCAATTTGGATTTGCAGTCTCTGCCATTTGCCCAGAATCTGAACCCTGAACTGCTTGGTGCCATTGTAGCTCTTCTTGCTCTTGGCTTCACTGCAGCTTACAAATATCTCACCAGACCACCTAAAGGATGTTTGGACCCTGAAAATTTCAAAGAATTCAAACTGATAAAGAAGACACAACTTAGCCACAATGCTGCAAGATTCAGATTTGCTCTTCCTACTCCTTCTTCCATATTGGGTCTTCCTGTTGGAAAAAATATACTTGTTAGAGGAATAGATAGCGAAGGAGAAGAAGTTAAGAGATCATATACTCCAATCACGTTGGATTCAGATGTTGGATACTTCGAATTGGTTGTGAAGATGTACCCAAATGGAAAGATGTCCCACCATTTTAGAGAAATGAAGGAAGGTGATTATTTGTCTGTGAGGGGTCCAAAGGGACGTTTCAGTTACAAACCTGGGCAAGTTAGGGCATTTGGAATGATTGCTGGAGGCTCAGGCATAACTCCAATGTTTCAGATCATAAGAGCCATTCTAGAAAACCCTAAAGACAAAACAAAGGTGCACCTAATTTATGCCAATGTAACAGTGGAGGACATTCTGTTGAAGGAAGAACTAGATAATTTTGCAGACAAATTTCCTCGCAGATTTGAAGTCTATCATGTTCTTAATAAGGCTCCTCCAGAATGGAATGGTGGCATTGGGTTTATATCGAAGGAGATTATTAAATCACATTGCCCTCAACCAGCACAAAATATTCAGATACTAAGGTGTGGTCCACCAGGTATGAACATAGCCATGGCTACTCACCTTGATGAACTTGGCTACACATCAAACATGCAGTTTCAGTTCTAA 891 0.4074 MLELPLNMALRFPNLDLQSLPFAQNLNPELLGAIVALLALGFTAAYKYLTRPPKGCLDPENFKEFKLIKKTQLSHNAARFRFALPTPSSILGLPVGKNILVRGIDSEGEEVKRSYTPITLDSDVGYFELVVKMYPNGKMSHHFREMKEGDYLSVRGPKGRFSYKPGQVRAFGMIAGGSGITPMFQIIRAILENPKDKTKVHLIYANVTVEDILLKEELDNFADKFPRRFEVYHVLNKAPPEWNGGIGFISKEIIKSHCPQPAQNIQILRCGPPGMNIAMATHLDELGYTSNMQFQF* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1952 296 Pfam Oxidoreductase FAD-binding domain 65 163 IPR008333 -
Pvu11g1952 296 CDD cyt_b5_reduct_like 65 296 - -
Pvu11g1952 296 PANTHER NADH-CYTOCHROME B5 REDUCTASE 1 296 IPR001834 GO:0016491
Pvu11g1952 296 Gene3D Translation factors 53 153 - -
Pvu11g1952 296 PANTHER NADH-CYTOCHROME B5 REDUCTASE 1 296 - -
Pvu11g1952 296 Gene3D - 154 296 IPR039261 -
Pvu11g1952 296 PRINTS Cytochrome B5 reductase signature 91 102 - -
Pvu11g1952 296 PRINTS Cytochrome B5 reductase signature 113 120 - -
Pvu11g1952 296 PRINTS Cytochrome B5 reductase signature 149 163 - -
Pvu11g1952 296 PRINTS Cytochrome B5 reductase signature 172 191 - -
Pvu11g1952 296 PRINTS Cytochrome B5 reductase signature 210 221 - -
Pvu11g1952 296 PRINTS Cytochrome B5 reductase signature 266 274 - -
Pvu11g1952 296 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 152 291 IPR039261 -
Pvu11g1952 296 Pfam Oxidoreductase NAD-binding domain 173 276 IPR001433 GO:0016491
Pvu11g1952 296 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 172 191 IPR001709 GO:0016491
Pvu11g1952 296 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 210 221 IPR001709 GO:0016491
Pvu11g1952 296 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 266 274 IPR001709 GO:0016491
Pvu11g1952 296 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 60 164 IPR017927 GO:0016491
Pvu11g1952 296 SUPERFAMILY Riboflavin synthase domain-like 53 165 IPR017938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1952 Pvu-Chr11 46444696 46451231 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1952 56 296 NADPH P450 reductases AT5G17770 68.465 5.06e-130 369