Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1950 ATGGTCGGAAACTGCTTGCCGCCGGTGAAGATCACCGGAAGCGGCCGGCCGGTGCTCGAACCGAACGAAATAGAGTGCTTCTTCCTCTCCGGTGTTGATCTTCTCTGCGAAGACGACCCCACCACTTCCTTCCCCCACCTCAAATCCGGTCTCCTAATCCTCACCACCCACCGTCTCCTCTGGCTGCCGGAATCCGATGCCTCGAGCGGTGGAGCAGCCGGTGGAGTCCCCCTCGCCGCGGTCTCCCACATTTTCTCCGTCAAGAAGTCCCTTCGCTCGGTGTTCTCCTCGCCGCGGGTCCGGTTCCAGGTGTCGATGTCGCCGGAGGGGCGAGTCGCGGCGGTGGGATCGCAATCGGTGGTGGTGACGGTGGTGGTGAGGGGGAAGGGGGACTGCGACGCGTTTCTGGCCAAGCTTTGGGAGAATTGGCGCGCCAGAGCGTGGGAGGACGCAGGGAGTGGGTCGAGTAATGCGGCGGCGACGGCGGCGGCAGAAACGGCGACGCCATCGTCATCAGGAGGAATTTATTCGAGTGACGGGACGGTGAAGATGGTGGGAGTGTCGGGGATACTGAGAAAAGAGCAGGAAATGTGGGAGAGTACTGATAGAAGCTTGCAGGATGCTTTTCAGGATTTGAATGCTCTCATGAGCAAGGCTAAAGAGATGGTGATGCTAGCAGAGAAAATGAGGCTAAAACTTTTGTCCGGCTCAAATTCTCAAACAAATGCGACTAATGATGAGGAGATGGGTTCAAAGGAAGAGATGCAAGATTGGTTATTGAGTGTTGGTATTATATCCCCAGTCACCAAAGAGTCTGCGGGTGCTTTGTATCATCAACAACTTTCTCGTCAGTTGGCAGATTTTATTAAAGTTCCACTTGAGAAAGCTGGGGGAATGATCAATCTTATTGATATATATTGTCTATTCAATCGTGCTCGTGGCACAGAATTGATCTCACCCGATGATTTGTTGCAAGCATGTTCTCTGTGGGAGAAGTTTGATGTCCCGGTGGTTCTGCGAAAGTTTGATAGTGGAGTCATGGTAATACAAACTAAGTCTCACAGTGATGAGGAGGTTTTCAATAATGTCAAGATGCTTGTTATGAAACCTGATGCTCTTCGAGCTGGGATAAGTGCTAGCGATGCTGCAAGGACACTAGGGGTTGCCCCAGCAATGGCAAAGGAGCATCTCTTATCTGCTGAGAGCAAAGGTTTACTATGCAGAGATATAAGCCCAGATGGATTTCGCTTCTATATTAACTTGTTCGCTGAAATTGACCAAGATGATATATATTTAGTAAAAGATCGAGGAATTTATGCCTCGTGGGTACAGGCTAACCATAGTCATGCTTAA 1353 0.5085 MVGNCLPPVKITGSGRPVLEPNEIECFFLSGVDLLCEDDPTTSFPHLKSGLLILTTHRLLWLPESDASSGGAAGGVPLAAVSHIFSVKKSLRSVFSSPRVRFQVSMSPEGRVAAVGSQSVVVTVVVRGKGDCDAFLAKLWENWRARAWEDAGSGSSNAAATAAAETATPSSSGGIYSSDGTVKMVGVSGILRKEQEMWESTDRSLQDAFQDLNALMSKAKEMVMLAEKMRLKLLSGSNSQTNATNDEEMGSKEEMQDWLLSVGIISPVTKESAGALYHQQLSRQLADFIKVPLEKAGGMINLIDIYCLFNRARGTELISPDDLLQACSLWEKFDVPVVLRKFDSGVMVIQTKSHSDEEVFNNVKMLVMKPDALRAGISASDAARTLGVAPAMAKEHLLSAESKGLLCRDISPDGFRFYINLFAEIDQDDIYLVKDRGIYASWVQANHSHA* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1950 450 Pfam Vacuolar protein sorting protein 36 Vps36 11 104 IPR021648 GO:0032266|GO:0043130
Pvu11g1950 450 Gene3D - 274 351 IPR036388 -
Pvu11g1950 450 Gene3D - 10 154 IPR011993 -
Pvu11g1950 450 ProSiteProfiles GLUE domain profile. 9 155 IPR021648 GO:0032266|GO:0043130
Pvu11g1950 450 PANTHER VACUOLAR PROTEIN-SORTING-ASSOCIATED PROTEIN 36 7 429 IPR037855 GO:0000814|GO:0032509|GO:0043130
Pvu11g1950 450 Pfam EAP30/Vps36 family 185 409 IPR040608 -
Pvu11g1950 450 SUPERFAMILY "Winged helix" DNA-binding domain 313 425 IPR036390 -
Pvu11g1950 450 Gene3D - 353 424 IPR036388 -
Pvu11g1950 450 SUPERFAMILY PH domain-like 5 133 - -
Pvu11g1950 450 Gene3D - 200 273 - -