LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu11g1929	ATGGCACCAAAACCAGTTTACCTTTCTCATTTACTCCTTTTAGTCTTGTTTCTTGCCACCATCCAACTTTCAGAGCAGTTAGAGTTTTCTCAGTCTCAAACACTTCTCAAGGTTCAGCAACTTCTTGGCTATCCATCAGCATTAAGTACCCTCAGCAGCACCACAGACTTTTGTAATATTGAACCTACCCAATATTTGACAATAGTCTGCTATGAGGATAGCTTGACACAGCTGCATGTTGTTGGCAACAATGAGTATGCTCCATTGCCTCCAAACTTCTCCTCAGATACTCTGTTTGCTACACTAGGCACTCTATCAAGCTTGAAAGTCCTCTCTCTGGTTTCTCTTGGACTCTGGGGGCCCTTACCTGAAAGCATTGCACAGTTGTCTTCATTGGAAATACTTAACATTAGCTCAAACCACTTCAATGGAGCCATTCCATCTCAACTTTCACTTCTCAGGAACCTGCAGTCAGTGGTACTTGATGATAACAGCTTCAGTGCTGAAATTCCTAGCTGGGTTGGCTCACTTCAAGGTTTGGCTGTCCTTAGTATGAAGAAAAACTGGCTTAGTGGGAGCCTTCCAACTTCATTGGATGCTCTTCAGACCCTGAGGGTATTGGATCTATCAAGTAATCAGTTATCTGGGGAAGTTCCTCATCTCAAGAATTTGGCAAATCTTCAAGTTCTTAACTTGGAAAACAACACATTTGGACCTCATTTTCCTTCACTCCCCACCAAGTTAGTTTCTCTTGTGCTCAGAAATAATAGCTTCAAGCTAAGTGTCCCCTCTGGTTTAAGTTCTTCTTATCTGCTTCAAAGGCTGGACCTTTCATTGAATGGCTTTGTGGGGCCATTTCCATCATCCTTATTGTCACTTCCTTCCATAAATTATCTTGATATTTCCTCAAATAAATTCACTGGAATGCTTTTCAATAACATGTCATGCAATGATGATCTCCACTTTGTAAATTTGTCTTCAAATCTTCTCAAAGGGGAAATTCCCGCTTGTTTGGAACCAAAGACCAGGGTTGTTCTGTATGCTAGAAACTGCTTATCAACTAAGAACCAAGATCAGCACCCTTCAGATTTCTGCAGCAATGAGGCTTTGGCAGTGAAAATCATACCCCGTCAACCAAAGCACAAGAGAACAACTGGTAAAACAGTAATTGTATCAAGTATGGGAGGTGTTGTTGGTGTAGTGCTGATTCTAGGAGTAGTTATCTTGGTTGTTAGCCGAGTTCATAAGAAACAAGTAGTGAAAATACCTTCACAGTCCCCTTTGGAAAATGTCACCAGCCAGTTACATAATGAAGATGAAGTGAAAACTACTACAAGGTCCATAATGGAGCACATCATCAGAAGGGTTCCTGACAAACTTGCTGTGGAAGCACTTACAAGATCCATAAAGGAGCATGTAATGTGCCGAGTGAAAAATAAGCGTGTTGTAAGGGCATCGACAAGGTCCATAATTGAACATGTATCATCAGTTAACACAGCAAAACTACTCACAGATGCAAGGTGTATATCACAAACAATGAAGATGGGAGCCAGCCTTCCTGCTTATAGGACCTTTGCTTTGGATGAACTTAAGGAATCTACAAATAATTTTGATGCATCAAGTTTCATAAGTGAAGGCCCACATGGTCAGATTTATAAAGGGGTTCTCTCTGATGGGATGCACATTGCTATTAGAGGTTTGAAAATGAGAAAGAGACATGGCCCTCAAACTTACATGCACCATGTTGAGATGATTTCAAAGCTAAGGCATTCACACTTGGTTAGTGCCCTTGGGCATGCTTTTGAGTGCAACCAGGACGATTCATGTGTGAACCGTGTATTTCTCATATTTGAGTTTGTTTCAACTAGAAGTTTAAGAACCTGCGTTTCTGGATCTTCTGGGGAAAAGATTTCTTGGATTCAGAGAATAGCAGCTACCATTGGAGTGGTGAAAGGCATTCAATTTTTGCACACAGGGATAGTACCTGGACTATATTCAAATAATCTCAGGATTACAGATATTTTTTTGGACAACAGTAACAATGTTAAAATAAGCAGCTACAATCTGCCACTTTCTGCTGAAAATAAAAGAATGATCAGCAGTGGAACTTCCCCTGGACTCAAAGGAAATATCCAAGCAAGGATAAAGGGTGAAGACAAGAATGATGTCTATGATATTGGGGTAATCTTGCTAGAAATCATTCTGGGCCGACCAATAATGTTCCACAATGAAGTTGGAACACTAAAAGATCTTTTACATGTAAGCATCAAAACTGATGACATAGCTAGAAGAAGTATTGTTGACCCAGCAGTTCACAAGGAATGCTCAGATGAATCATTAATGACAATGATGGAGATATGTGTAAGGTGTCTCTCTGATGACCAAACTGAAAGGCCTTCTGTTGAAGATATTCTCTGGAACTTGCACTTTGCAGCACAAGTTCAGAATTCATGGAAAAGAGACTCAAGTGATCACAGTTACTCTCCTGCACCATCCTCCAGGGACATATAG	2511	0.4062	MAPKPVYLSHLLLLVLFLATIQLSEQLEFSQSQTLLKVQQLLGYPSALSTLSSTTDFCNIEPTQYLTIVCYEDSLTQLHVVGNNEYAPLPPNFSSDTLFATLGTLSSLKVLSLVSLGLWGPLPESIAQLSSLEILNISSNHFNGAIPSQLSLLRNLQSVVLDDNSFSAEIPSWVGSLQGLAVLSMKKNWLSGSLPTSLDALQTLRVLDLSSNQLSGEVPHLKNLANLQVLNLENNTFGPHFPSLPTKLVSLVLRNNSFKLSVPSGLSSSYLLQRLDLSLNGFVGPFPSSLLSLPSINYLDISSNKFTGMLFNNMSCNDDLHFVNLSSNLLKGEIPACLEPKTRVVLYARNCLSTKNQDQHPSDFCSNEALAVKIIPRQPKHKRTTGKTVIVSSMGGVVGVVLILGVVILVVSRVHKKQVVKIPSQSPLENVTSQLHNEDEVKTTTRSIMEHIIRRVPDKLAVEALTRSIKEHVMCRVKNKRVVRASTRSIIEHVSSVNTAKLLTDARCISQTMKMGASLPAYRTFALDELKESTNNFDASSFISEGPHGQIYKGVLSDGMHIAIRGLKMRKRHGPQTYMHHVEMISKLRHSHLVSALGHAFECNQDDSCVNRVFLIFEFVSTRSLRTCVSGSSGEKISWIQRIAATIGVVKGIQFLHTGIVPGLYSNNLRITDIFLDNSNNVKISSYNLPLSAENKRMISSGTSPGLKGNIQARIKGEDKNDVYDIGVILLEIILGRPIMFHNEVGTLKDLLHVSIKTDDIARRSIVDPAVHKECSDESLMTMMEICVRCLSDDQTERPSVEDILWNLHFAAQVQNSWKRDSSDHSYSPAPSSRDI*	837

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu11g1929	836	Gene3D	Ribonuclease Inhibitor	30	152	IPR032675	-
	Pvu11g1929	836	ProSiteProfiles	Leucine-rich repeat profile.	203	225	IPR001611	GO:0005515
	Pvu11g1929	836	PANTHER	LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED	477	826	-	-
	Pvu11g1929	836	PANTHER	LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED	10	424	-	-
	Pvu11g1929	836	SUPERFAMILY	L domain-like	42	354	-	-
	Pvu11g1929	836	Gene3D	Ribonuclease Inhibitor	153	242	IPR032675	-
	Pvu11g1929	836	Pfam	Leucine rich repeat	154	214	IPR001611	GO:0005515
	Pvu11g1929	836	Pfam	Protein kinase domain	542	805	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pvu11g1929	836	Gene3D	Transferase(Phosphotransferase) domain 1	621	829	-	-
	Pvu11g1929	836	Gene3D	Phosphorylase Kinase; domain 1	497	619	-	-
	Pvu11g1929	836	ProSiteProfiles	Protein kinase domain profile.	537	810	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pvu11g1929	836	PANTHER	INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED	10	424	-	-
	Pvu11g1929	836	PANTHER	INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED	477	826	-	-
	Pvu11g1929	836	SUPERFAMILY	Protein kinase-like (PK-like)	517	810	IPR011009	-
	Pvu11g1929	836	Gene3D	Ribonuclease Inhibitor	243	357	IPR032675	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu11g1929	Pvu-Chr11	46222024	46227927	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pvu11g1929	44	833	Miscellaneous Gene Families	AT3G03770	49.937	0.0	706

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-VI-1	Pvu11g1929		Pkinase	2.9e-14	CL0016