Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1928 ATGGCTGCAACCACCACTCTCTCCTTTTTCCACTCTCCATATCCAACGCTCTCTTCTCACTCTCAATTTTCCCTCTCTTCACCTTCTTCGCTCTTCAAACCCTACACTGTTGCTTCCCGCCACAACCTCCGCATCTCCACCACCGCCGCCGCCGCCCTCACTCTCTCTGCTTTTCCAAACGCAAACTCTCCCACGTTTCTCGCAACGGCTTCTCGGAATACTCAGCCCATGCTCCCTCCTTTCAACGTTCTGATTACTGGCTCAACCAAAGGAATTGGGTATGCATTGGCGAAAGAGTTTTTAAAAGCTGGTGACAACGTCCTGATTTGCTCAAGATCAGATGAAAGGGTAGAGGCTGCTGTCCATAGCTTGAGAGTAGAATTTGGGGAGCAGTATGTGTGGGGAACTAAATGTGATGTCAGAAATGCAGATGATGTGAAGAATTTAGTTTCATTTGCTCAAGAAAAACTGAAATACATTGATATATGGATCAACAATGCTGGATCAAATGCATATAGCTATAAGCCACTTGTTGAGGCTTCAGATGAAGATCTTATTGAGGTGGTTACAACAAATACACTTGGCTTGATGATATGTTGTCGAGAGGCAATCAAGATGATGTTGGACCAACCTCGAGGAGGTCATATTTTCAATATTGATGGAGCAGGTTCGGACGGGAGGCCAACTCCTAGGTTTGCTGCATATGGAGCAACAAAGAGAAGTGTGGTGCACTTAACAAAGTCGTTACAGGCAGAATTGCGGATGCAAGATGTTAAAAATGTCCTAGTGCATAATCTTTCGCCAGGAATGGTTACAACGGATCTTCTCATGTCTGGTGTTAATACAAAGCAGGCAAAGTTTTTCATTAATGTCTTGGCAGAACCGGCTGAAGTGGTTGCAGAATACTTAGTTCCAAACATTAGATCCATCCCTGCAAACGGATCAACGAAACCAACATACATTCGATTCCTCACTGGTTTGAAAGCCTATTCCCAGATATTTTCAAGATTCGCATTTGGGGCAAGGAGGAACCGATACATTCTTGAAGATTGA 1053 0.4435 MAATTTLSFFHSPYPTLSSHSQFSLSSPSSLFKPYTVASRHNLRISTTAAAALTLSAFPNANSPTFLATASRNTQPMLPPFNVLITGSTKGIGYALAKEFLKAGDNVLICSRSDERVEAAVHSLRVEFGEQYVWGTKCDVRNADDVKNLVSFAQEKLKYIDIWINNAGSNAYSYKPLVEASDEDLIEVVTTNTLGLMICCREAIKMMLDQPRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVHLTKSLQAELRMQDVKNVLVHNLSPGMVTTDLLMSGVNTKQAKFFINVLAEPAEVVAEYLVPNIRSIPANGSTKPTYIRFLTGLKAYSQIFSRFAFGARRNRYILED* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1928 350 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 169 IPR002347 -
Pvu11g1928 350 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 214 222 IPR002347 -
Pvu11g1928 350 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 235 254 IPR002347 -
Pvu11g1928 350 PRINTS Glucose/ribitol dehydrogenase family signature 82 99 IPR002347 -
Pvu11g1928 350 PRINTS Glucose/ribitol dehydrogenase family signature 158 169 IPR002347 -
Pvu11g1928 350 PRINTS Glucose/ribitol dehydrogenase family signature 208 224 IPR002347 -
Pvu11g1928 350 PRINTS Glucose/ribitol dehydrogenase family signature 235 254 IPR002347 -
Pvu11g1928 350 PRINTS Glucose/ribitol dehydrogenase family signature 259 276 IPR002347 -
Pvu11g1928 350 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 222 250 IPR020904 GO:0016491
Pvu11g1928 350 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 82 301 IPR036291 -
Pvu11g1928 350 PANTHER NON-SPECIFIC LIPID TRANSFER PROTEIN-RELATED 33 350 - -
Pvu11g1928 350 CDD SDR_c 83 304 - -
Pvu11g1928 350 PANTHER CHLOROPHYLL(IDE) B REDUCTASE NOL, CHLOROPLASTIC 33 350 - -
Pvu11g1928 350 Pfam short chain dehydrogenase 83 278 IPR002347 -
Pvu11g1928 350 Gene3D - 82 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1928 Pvu-Chr11 46210796 46218112 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1928 83 275 Acyl Lipid Metabolism Gene Families AT1G24360 30.808 8.42e-17 78.2