Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1926 ATGCGCAATTCAAAGTTTGCAGTGTCACTGCTCATAGCACGTGCCAAGTCCCTCCAACTTCACCATCACACGTGTCACTGCGTCGCTTCTTCTTCTTCTTCTCCTACCTCAACCTCACTCTTCAGGTTTCTCCCTTCTTCCATACGAAACGCGAAGTCCGTCGCCGCCACGCGCCTCTTCTCCAGCTACTATTCCGTCGAACAGTTCTCCGATGATGAATACGAATGTGACTTTGAGAACCAGCAGGTATCGTCTACGGTGGCCAATGTGGACGAGTGGAAATGGAAACTCAGCATGCTGTTACGCAGCGAAAAGGACCAGGAGATTGTATCAAGAGATAGAAAAGATAGGAGGGACTATGAACAGATAGCTAACCTTGCCAAAAGAATGGGGCTATACAGTGAGTTGTTTGGAAAGGTGGTTGTTGCAAGCAAGGTGCCTCTTCCCAACTACCGTCCAGATTTGGATGACAAACGTCCACAAAGAGAGGTGGTTATTCCACTAAGCTTGCAAAGGAGGGTTGAGGGTTTGCTGCAGGAATACCTTGATAGACTTCAGTTGAATTCTGCAAAGGCAACTGGCAGCCTGGATGATGTGAACTCTGCCAATGAAGTCAAAGAAATAGACATGGATGAAAATACTGATTCTTTTGTGGATGAATCTGTTATGGAAAAGGTTCTCCAGAAGAGGAGTTTGAGGATGCGCAATATGCAAAGAGCTTGGCAGGAATCACCTGAAGGCAGGAAGATGCTGGAATTCCGGAAATCTCTACCATCGTTTATGGAAAAGCAAGGTTTACTTCAAGCTATAGCACACAATCAGGTGATAGTTATATCTGGAGAGACTGGCTGTGGTAAAACCACTCAAATTCCTCAATATGTATTGGAATCACAGATAGAGTCTGGCCGTGGAGCATTTTGTAACATTATTTGCACGCAGCCTCGAAGGATATCTGCCATGGCAGTATCTGAGAGAGTGTCAGCCGAGCGGGGAGAACCTCTTGGTGAAACAGTTGGCTTCAAAGTTCGATTGGAAGGAATGAAAGGGAAAAATACCCATCTGCTATTTTGTACCAGTGGTATATTACTTAGAAGGTTGCTGAGTGATCGAAATCTGAATGGTGTAACCCATATTTTTGTGGATGAAATTCATGAAAGAGGCATGAATGAAGACTTCTTATTGATTGTGCTAAAGGATCTGCTTCCACGGCGTCGGGATTTAAGGTTGGTTTTAATGAGTGCCACCTTGAATGCTGAGCTTTTTTCAAATTATTATGGAGGTGCTCCCACATTTCGAATTCCGGGTTTCACCTATCCTGTTAGATCTCACTTTTTAGAAGATGTGTTGGAAATGACTGGATACAAGTTGACTTCCTTCAACCAAATTGATGATTATGGTCAAGAGAAACTGTGGAAAACACAAAAACAATTAGCACCACGGAAGAGGAAAAATCAGATCAATTCTCTTGTTGAG 1473 0.4386 MRNSKFAVSLLIARAKSLQLHHHTCHCVASSSSSPTSTSLFRFLPSSIRNAKSVAATRLFSSYYSVEQFSDDEYECDFENQQVSSTVANVDEWKWKLSMLLRSEKDQEIVSRDRKDRRDYEQIANLAKRMGLYSELFGKVVVASKVPLPNYRPDLDDKRPQREVVIPLSLQRRVEGLLQEYLDRLQLNSAKATGSLDDVNSANEVKEIDMDENTDSFVDESVMEKVLQKRSLRMRNMQRAWQESPEGRKMLEFRKSLPSFMEKQGLLQAIAHNQVIVISGETGCGKTTQIPQYVLESQIESGRGAFCNIICTQPRRISAMAVSERVSAERGEPLGETVGFKVRLEGMKGKNTHLLFCTSGILLRRLLSDRNLNGVTHIFVDEIHERGMNEDFLLIVLKDLLPRRRDLRLVLMSATLNAELFSNYYGGAPTFRIPGFTYPVRSHFLEDVLEMTGYKLTSFNQIDDYGQEKLWKTQKQLAPRKRKNQINSLVE 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1926 491 CDD DEXHc_RHA-like 273 433 - -
Pvu11g1926 491 PANTHER ATP-DEPENDENT RNA HELICASE 60 465 - -
Pvu11g1926 491 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 266 445 IPR027417 -
Pvu11g1926 491 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 267 434 IPR014001 -
Pvu11g1926 491 Gene3D - 205 435 IPR027417 -
Pvu11g1926 491 Pfam DEAD/DEAH box helicase 267 418 IPR011545 GO:0003676|GO:0005524
Pvu11g1926 491 SMART ultradead3 255 448 IPR014001 -
Pvu11g1926 491 PANTHER DEXH-BOX ATP-DEPENDENT RNA HELICASE DEXH5, MITOCHONDRIAL 60 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1926 Pvu-Chr11 46188434 46193793 Transposed