Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1920 ATGGTTGCTGAAGGAACCAAAAGGCCTCAAATACTACCACCACCTCGTACAATCAACGTGCATAAATATGCTGAATCCCGTGCTGTTGAGCTCGAGAGTCTTCAATCTATCATAAAAAATAGAGTAAACAATGATTATACGGCTCGAAGGAACAAGAGGAGAAGAACAACTGCATTTGACAACCAAATTGCAAGGAAAGGGTGCAGAAGAAAGAGACAGAAACTGGGTATAGTTGGCAGCGCTCTTGCTAAATCAGGTGTGGATGAGGATCAATTAAAGAAGCTTCCTCGGCGTGTTCGTCGGAGATATGAACTTAAGAACAACCCAGAGAATGGCTTTTGCACTTCTGGGGATGGAACCAAGAGGCTGAGAACTCATGTTTGGCATGCAAAGCGGTTTGCTATGACCAAGATTTGGGGTTACCATCTTCCTTTGTGTCTCCAAGGAAGAGGGAAAGGTTCAAGGGCACTCTTGAAAAGGCTCAAACAAGGGGTGCTTGTACATGATGCAAGCTATTGCACTGCTATCCAATTGGAGGGTCCGGAGGATTCATTAATGTCGGTATTAAGATTGGTACTAGAACCTTCTCCAGCAACAACACATCCTGAAAATCATGATGACTCTGTTCTCTCCGGTGCAACCTATGGAATTGCAATGTTGCATCAAGTTGGAGGTCCCATTTCTCCTCCAATTGCTCCTGTGACCTATATATGGCAACCAACTTCCCAACAAAATATAAGTACACAGCTAGATGAACGAAATCATTATACTTCTTTTGGACAAAATGGTATCAGTAATGATTCAAACAAACATGATGTTGAATTATGTGAAAAATCAGACAAAATGGAGCATGGTTCTTCATATAGACACCTTTGGGTGTGGATACATGCTTCTGCCTTTGAAGAAGGATTTGATAATCTAAAAATTGCCTGTCGGAAAGAGATGGAGAAGAGGGGCATATTAATTAATTGCTTTTCCCTTGAGGGTCAGCTTGCAAAATTAGAATTAATTGGATCAGGGACATTTCAACTTCTTCAAAAGATACTGCATCCAGTTGGAGGTATTTCAGAGAATCATTGGCAATTAAAGAAACACATGGCTATTGAAGAAGAGTGTATTTCTCAGAATAGAAATTCAACCATACTGAAAAATGGAGAACATTTTTCTTCTTGTGCTATATTACCTCTTAATGTTAAGGATCCTCGAGAATTGCCATGGAAGAGGAGTGTTGTTCCAGTGGAGCCCATTTCAACTAAGACTTCGAGTGATTCATCTGAAACAAAATGCAAAGAGCTTGCTGAACTGGGAGGAATTTTGGAAGAGAATAAAGACTTATCTCCATTATCATCATCAAAACTTGAAGATAGCCAGTCTAATATTGATGATCTATGGTATGCTACCACCAGAGGGCTGAGGCCCCCAGTAGAAGACAGTGTCCTTTCCAAGGAGAAACACCATGAACGAATGGTTAATTTCTGCATTGATGATATAGATTCTGGAGAGGCCAATTCTTCAACCAAGGTGCAGTGCTCGAGATCTTGCCCTATTCTTCTTTTAAAAAATGATATGAAGGAATTGAGCATAGGATGGTCCGTTATACTTCCCTTAAGTTGGGTCAAAGCTTTCTGGATTCCGCTCATCTCCAATGGGGCACATGCAATAGGTTTGCAAGAGAAGCACTGGATTACATGTGAAATGGGGCTACCACTTTTCCCTTCAGATTTCCCAGATTGTAAGGCATACTCTTGCCTAATGGAATATAAAGATGCTGCCTTTAATAAAAAGGAAGAACTTCGTCCTCCATCCATAAGGCATTTGAGAGTTCCCATCCAACCTCCATGGGGTATTGTTTGCATTACTTTTGAAAAAATGATTAGTGCAATGGAGACTCCTAATCTTTCAACCAGGGAAGATTTGACCAACACTAATTCATTACCAAACCCTTGTCCCGGTAGCTTTAAAATCTCAAACTCTGATTCTTGGGGTAATTCGTTTGATGGAGCTGTAGTTAGGACTGGTTCTATGCTGACCACTTTCCTCCATGAAACCAAAGTTGGTCAGTTGTTATTGTTTCCTTATGCAGCAGATGGAGAGGCTGGAATCTCCAAGTTTATTAATGGAGAACTAAAGCTTGATCCAAGGTATAAAAGCTCTGACATATATGACCATAAGCCATGTTTTGTAAGAGTTCATCTTCATCCATTCAAGGAAGGATGTTTTGAAGAGGGTGCAGTTATTTGTGCACCACATACTTCTGATATATTTTTATGGACTAAAAGTTCAGAGAGAAGTGAAGAGGGACTTCAAATGTCTCAGTCTGCAATGCGATTATACTTCAAAGAGCATTCCTCTGGTAGATGGGAAATGCAGATACCAGATGATGCAATTTCTAGAAAATCTCATCGGTGGCCTATTGGCTTTGTCACAACAGCTTCTGTTCAAGGAAGCAAGAGTCTTGTTGCTGAGGGCTTTTGTGAGGCTGTTTTACTATCTCATTTAAGAGAAGAGCAGTGGAAGGAGATGCCTATGAAACAGAGAAGGAGGGAAATATACGTACTTGTCAGGAATTTGAGATCTACAGCATATAGACTTGCTCTGGCCTCTATCGTTCTTGAGTATAAGGAAAATGACATTGGATTCTTGTAA 2646 0.4055 MVAEGTKRPQILPPPRTINVHKYAESRAVELESLQSIIKNRVNNDYTARRNKRRRTTAFDNQIARKGCRRKRQKLGIVGSALAKSGVDEDQLKKLPRRVRRRYELKNNPENGFCTSGDGTKRLRTHVWHAKRFAMTKIWGYHLPLCLQGRGKGSRALLKRLKQGVLVHDASYCTAIQLEGPEDSLMSVLRLVLEPSPATTHPENHDDSVLSGATYGIAMLHQVGGPISPPIAPVTYIWQPTSQQNISTQLDERNHYTSFGQNGISNDSNKHDVELCEKSDKMEHGSSYRHLWVWIHASAFEEGFDNLKIACRKEMEKRGILINCFSLEGQLAKLELIGSGTFQLLQKILHPVGGISENHWQLKKHMAIEEECISQNRNSTILKNGEHFSSCAILPLNVKDPRELPWKRSVVPVEPISTKTSSDSSETKCKELAELGGILEENKDLSPLSSSKLEDSQSNIDDLWYATTRGLRPPVEDSVLSKEKHHERMVNFCIDDIDSGEANSSTKVQCSRSCPILLLKNDMKELSIGWSVILPLSWVKAFWIPLISNGAHAIGLQEKHWITCEMGLPLFPSDFPDCKAYSCLMEYKDAAFNKKEELRPPSIRHLRVPIQPPWGIVCITFEKMISAMETPNLSTREDLTNTNSLPNPCPGSFKISNSDSWGNSFDGAVVRTGSMLTTFLHETKVGQLLLFPYAADGEAGISKFINGELKLDPRYKSSDIYDHKPCFVRVHLHPFKEGCFEEGAVICAPHTSDIFLWTKSSERSEEGLQMSQSAMRLYFKEHSSGRWEMQIPDDAISRKSHRWPIGFVTTASVQGSKSLVAEGFCEAVLLSHLREEQWKEMPMKQRRREIYVLVRNLRSTAYRLALASIVLEYKENDIGFL* 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1920 881 ProSitePatterns Neurotransmitter-gated ion-channels signature. 564 578 IPR018000 -
Pvu11g1920 881 Pfam POPLD (NUC188) domain 529 604 IPR012590 -
Pvu11g1920 881 Pfam Ribonucleases P/MRP protein subunit POP1 123 180 IPR009723 -
Pvu11g1920 881 PANTHER RIBONUCLEASES P/MRP PROTEIN SUBUNIT POP1 13 868 IPR039182 GO:0000172|GO:0001682|GO:0005655