Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1918 TTCTTCATCTCTCTCTCTCTGTCTCTCTTCAGCTTCAGGTTTCTTGCAACAATGGCCGCATCTAGCTCTGTTGTGGACGACTATTTGGACTATGGGCATGCCAAATGCATTGCCTTCAATCGCCGTGGTACACTTCTTGCTGTTGGGTGCAAAGATGGAAGGTGCGTTATCTGGGATTTTGAAACCCGTTGCATTGTTAAAGAGCTAAAAGATGAAGAATGTTCATCTCCAATAAACAGTGTCTGTTGGTCGAGGTCTTGTAATCATCTTCTTGTGTCTTCTGCTGACCAGTCATTGACACTATGGGATGTGAAGAATGATAATAGGATAACAAGAATAGTTTTACAGAAAAACCCTCTACAAGCTCGTCTTCATCCACGTTCCTCTAAACCACCACTTTGCTTGGCATGCCCTCTCTCAGTTCCTCCCCTGATTGTTGACTTGAACACAGAAAAAACAACTTCGCTTCATATTTGTGTCTTACATAGCAGGTGTGACTGTAGTGATGCAACTACTTTCTGTTCACCAACTCCTGCGTGTTTTAACAAGTATGGAAACCTGGTTTATGTGGGAACCTCAAAGGGGAAAATTCTTTTAATTGACTATATAGAAAATGAGGTGCATGCCATGATTCTTATCCCTGGTGATTGTGAAGTGAAGAACATTGTGTTCAGCAGAAATGGACGGTACCTTCTAGCAAACTCAAGTGATCGAATAATCCGGATCTATGAAAATCTTCTACCTCTGAAAGATGAAGTTAAAGCACTTGATGCTCTGAAAGGGAACTTCAGTGGCCTAAAGGGTACTGATAAGTTGCAGGCTGTAGGATCAAATTGCTTGACTTTGATCCGGGAGATGCAAGATTTAACCATGATTTCTCACTGGAAATCACCCTGCTTCAGTGACAATGGGGAGTGGGTTGTTGCTGGTTCTGCTAGTAAAGGAGGACACAAGATTTACATATGGGATAAAGCTATACAGGTGAAAATCCTTGAAGGGCCTAAGGAAAGCATTGTTGATTTAGCATGGCATCCTGCACGTCCTATTGTTGTATCCGTTTGTTTGGCTGGCAAAATTCATGTCTGGGCCAAAGATGTCTCAGAGAACTGCAGTGTATTTGTTCCTTTTGTAGAGCGAGAAGATGAATTTGATTTGAAATCTCCTGAGACTGAGAAGGAGGTGAAAAGATCTAAAGGTGATGAAGTTGAAGAAGGTGAAATTGTGGAGAATGTGGAGAATGTGGAGAAAGGTCTTGATTTCAGTGACTCTGACATGTCTCAAGAAGAGTTATGTTTCCTGCCAGCAAGTCCCACCTATAATGTTCCTGAACTGACAGACAAGTTAATAAGAAGTTCTCCTGAGTCGGTGGACAGCAATAACTCAAGTCCATCTGGAGATACTTCGGGAGAAGGAACTAACAGAAGGAGGACTCCTTCACAGTAG 1443 0.4227 FFISLSLSLFSFRFLATMAASSSVVDDYLDYGHAKCIAFNRRGTLLAVGCKDGRCVIWDFETRCIVKELKDEECSSPINSVCWSRSCNHLLVSSADQSLTLWDVKNDNRITRIVLQKNPLQARLHPRSSKPPLCLACPLSVPPLIVDLNTEKTTSLHICVLHSRCDCSDATTFCSPTPACFNKYGNLVYVGTSKGKILLIDYIENEVHAMILIPGDCEVKNIVFSRNGRYLLANSSDRIIRIYENLLPLKDEVKALDALKGNFSGLKGTDKLQAVGSNCLTLIREMQDLTMISHWKSPCFSDNGEWVVAGSASKGGHKIYIWDKAIQVKILEGPKESIVDLAWHPARPIVVSVCLAGKIHVWAKDVSENCSVFVPFVEREDEFDLKSPETEKEVKRSKGDEVEEGEIVENVENVEKGLDFSDSDMSQEELCFLPASPTYNVPELTDKLIRSSPESVDSNNSSPSGDTSGEGTNRRRTPSQ* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1918 480 MobiDBLite consensus disorder prediction 451 480 - -
Pvu11g1918 480 SUPERFAMILY WD40 repeat-like 34 362 IPR036322 GO:0005515
Pvu11g1918 480 SMART WD40_4 205 244 IPR001680 GO:0005515
Pvu11g1918 480 SMART WD40_4 62 103 IPR001680 GO:0005515
Pvu11g1918 480 SMART WD40_4 285 323 IPR001680 GO:0005515
Pvu11g1918 480 SMART WD40_4 21 59 IPR001680 GO:0005515
Pvu11g1918 480 SMART WD40_4 324 363 IPR001680 GO:0005515
Pvu11g1918 480 Gene3D - 144 408 IPR015943 GO:0005515
Pvu11g1918 480 Gene3D - 18 130 IPR015943 GO:0005515
Pvu11g1918 480 ProSiteProfiles Trp-Asp (WD) repeats profile. 75 112 IPR001680 GO:0005515
Pvu11g1918 480 Pfam WD domain, G-beta repeat 76 103 IPR001680 GO:0005515
Pvu11g1918 480 Pfam WD domain, G-beta repeat 32 59 IPR001680 GO:0005515
Pvu11g1918 480 Pfam WD domain, G-beta repeat 299 323 IPR001680 GO:0005515
Pvu11g1918 480 PANTHER RETINOBLASTOMA-BINDING PROTEIN 5 24 466 IPR037850 GO:0048188
Pvu11g1918 480 MobiDBLite consensus disorder prediction 437 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1918 Pvu-Chr11 46142230 46145052 Dispersed