Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1916 ATGGCTTTCAGGCAGAGAACACCAACTTTTCGTCCAAATCTTTCTATTCGTCGCGTCTTTGAAACTTTTCAGCCACGATCAGAGATCAAAGATCTTCCAGAAGCTTATCTTCTTCGTGTTTATCTTCCTGGTTTTCAGAGGGACAGTGTAAAGGTAACCTATGTGGCCTCTTCAAGAACAGTGAAGGCTACAGGAGAAAGACAAATTCAAGGCACCAGATGGTACAGATTTGATCAATCGTATCCGATTCCTGATTATTGTGAGCCAGAGGCACTTCAGGCCAAGTTTGAAACCCCAGTTCTCACCCTTACCATGCCAAAGAAGGCCACTTCACAAGATCATCCTAAACAACCATCCCAAGACAAAGGTGTAGCAGCTGAACCAAAGCTTGATGAAAAACTCCAAGATGCTACCACCACACCACCATCTACAACTACTACTAAAGTTGAAGAACCAATTCAAGGAAAGAAAAGTGTTTCACCACAACCTACAACTACTCTTGAAGGCACACCATCTGAGACCCCTTCAGAACCAATTAAGGGTCGAAAGGGTCAAGAGGAAGCTGTAGAAAGAGTTGGTTTTTCTGGTGAGAATCAAATGGGTGGGAAGGAGTTGGAGGCAAAACCAACACCAACAAGGGCAGCCTTGTTGCATGGAGATGAAAAGATTCAAAAGGGTCAAGAGATTGAGTCAAAACCAACACCAGTGCCAACCAAAATGGAAAGAGATGAAAAGCCTCAAAAGGGTCAAGAGGATTTTGAACCAAGAACAACGCTAACTAAAGTCAGAACGGCTGAAAAGTACCAGAAGGGTCAAGAGGATTTTGAACCAAGAACAACGCTAACTAAAGTCAGAACGGCTGAAAAGTACCGGAAGGGTCAAGAGGATTTAGAACCAAGACCGGCACCAGTAATGCTAACCAAAGTAAAAACTGCTGAAAAGTCCCAGAAGGATCAGGAGGATTTTGAACCAAAACCAACACCAACAATGCTAAACAAGGATAAAACAGATGAGAAGGCTCAAAAGGGTCAAGAGGAATTTGAACCTAAAGCAACATCAACAATGGAACCAAACATCAAAACAGAAGAGCAACCTCCAAAGGGTCAAGAGGAAGACAAGCCAAAACCTGATATAACAAATGTTACCAGAAAGCCAACAGTTAAAGAGCAATTGGAGGAAGAGAAGACAGAGGAAACAAGTGATGAAGATTCAGAAGAAAAAAGTGATGAAGATTCAGAAGAAACAAGTGATGAAGATGAAAAGGAAACAAGTGATGAAGATGAAGAGAAGGAGAGGATCACAAAGGAAGTTAAAGAGGAACCTTCTAAGTCAAGAAAGTCTGTGAAAGATAAGGAGCAGGCTGATTTTGGAGAGAAAGAAACCAATACAGAAAAAATGTTAGCCAAGGAAAAGGAAAAGCAATCTAACAACAGAACTTCTCTAAAAAAGGAACTGAAGAGTGAAGAGAATGCAACGGAAAGGGTTGGTTCTGTCTCCCACATTTTCACAAAATTTTCAGAAGGGACACTTAATGAGGAAGAGAAAAAATTAGCAGCAAATATTGGTGCTGCTGTTCTTGTCATTGCTGCATTGGGATATTACGTATCGTATAGGTTTTCCTTTTGA 1626 0.4127 MAFRQRTPTFRPNLSIRRVFETFQPRSEIKDLPEAYLLRVYLPGFQRDSVKVTYVASSRTVKATGERQIQGTRWYRFDQSYPIPDYCEPEALQAKFETPVLTLTMPKKATSQDHPKQPSQDKGVAAEPKLDEKLQDATTTPPSTTTTKVEEPIQGKKSVSPQPTTTLEGTPSETPSEPIKGRKGQEEAVERVGFSGENQMGGKELEAKPTPTRAALLHGDEKIQKGQEIESKPTPVPTKMERDEKPQKGQEDFEPRTTLTKVRTAEKYQKGQEDFEPRTTLTKVRTAEKYRKGQEDLEPRPAPVMLTKVKTAEKSQKDQEDFEPKPTPTMLNKDKTDEKAQKGQEEFEPKATSTMEPNIKTEEQPPKGQEEDKPKPDITNVTRKPTVKEQLEEEKTEETSDEDSEEKSDEDSEETSDEDEKETSDEDEEKERITKEVKEEPSKSRKSVKDKEQADFGEKETNTEKMLAKEKEKQSNNRTSLKKELKSEENATERVGSVSHIFTKFSEGTLNEEEKKLAANIGAAVLVIAALGYYVSYRFSF* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1916 541 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 18 127 IPR002068 -
Pvu11g1916 541 Gene3D - 4 113 IPR008978 -
Pvu11g1916 541 MobiDBLite consensus disorder prediction 427 493 - -
Pvu11g1916 541 PANTHER HEAT SHOCK PROTEIN 26 1 295 IPR045045 -
Pvu11g1916 541 PANTHER HEAT SHOCK PROTEIN 26 335 540 IPR045045 -
Pvu11g1916 541 SUPERFAMILY HSP20-like chaperones 9 114 IPR008978 -
Pvu11g1916 541 PANTHER HSP20/ALPHA CRYSTALLIN FAMILY PROTEIN 335 540 - -
Pvu11g1916 541 PANTHER HSP20/ALPHA CRYSTALLIN FAMILY PROTEIN 1 295 - -
Pvu11g1916 541 MobiDBLite consensus disorder prediction 107 495 - -
Pvu11g1916 541 MobiDBLite consensus disorder prediction 235 298 - -
Pvu11g1916 541 CDD ACD_sHsps-like 28 107 - -
Pvu11g1916 541 Pfam Hsp20/alpha crystallin family 29 116 IPR002068 -
Pvu11g1916 541 MobiDBLite consensus disorder prediction 363 379 - -
Pvu11g1916 541 MobiDBLite consensus disorder prediction 136 173 - -
Pvu11g1916 541 MobiDBLite consensus disorder prediction 395 426 - -
Pvu11g1916 541 MobiDBLite consensus disorder prediction 311 346 - -
Pvu11g1916 541 Coils Coil 388 408 - -
Pvu11g1916 541 Coils Coil 471 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1916 Pvu-Chr11 46120292 46124750 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0122 5 973738 975821 Pvu11g1916 11 46120292 46124750 PCT