Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1894 ATGCAGCTTCTGGAGAGTGGATTGAAGGTGAAGGAATATGAACTTCTGCGAAGAAACTTCAGTGATACTGGGTGCTTTGGATTTGGTATTCAGGAGCATATTGACTTGGGAATCAAGTATGATCCCTCAACTGGTATTTATGGGATGGACTTCTTTGTTGTTCTGGAACGCCCTGGCTATCGCGTCGGCCGCCGCCGCCGCTGCAAGTCTCGTGTTGGGATCCAGCATCGTGTTACCAAGGAGGATTCTATGAAGTGGTTCCAGGTGAAATACGAAGGTGTGATCCTCAACAAGTCACAGGCAATTGTTTAG 312 0.4776 MQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDSMKWFQVKYEGVILNKSQAIV* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1894 103 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 1 102 IPR002132 GO:0003735|GO:0005840|GO:0006412
Pvu11g1894 103 Pfam ribosomal L5P family C-terminus 2 86 IPR031309 -
Pvu11g1894 103 Gene3D - 1 99 IPR022803 -
Pvu11g1894 103 PANTHER 60S RIBOSOMAL PROTEIN L11-1 1 102 - -
Pvu11g1894 103 SUPERFAMILY RL5-like 2 95 IPR022803 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1894 Pvu-Chr11 45866486 45868955 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1894 1 103 Cytoplasmic Ribosomal Protein Gene Family AT2G42740 93.204 1.75e-70 206