Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1892 ATGTTGATACTAGTTCTTGGACTAGCTTCAGCTACTTTGTTAGTGATTGTTGCAGGTTATGTGTTGTATTGCCAGAGAAGAGTGTCAGGATATGAGAGTAAGGACATTGAAAGCTCAGAACACAAGGAGGAGGAGGTGGCTCTGAAGGAGGATTTGATGATCTTTCAAGGTGGGGAGGACCTTACAATATGTGACATATTGGATGCTCCAGGGGAAGTGATTGGAAAATCCAACTATGGAACACTGTACAAGGCCTTGTTGCAGAGGAGCAACAAGGTGAGGCTGCTCAGGTTTCTGAGGCCTGTGTGCACTGCAAGAGGTGAAGAATTGGATGAGTTGATTCAGTTTCTTGGAAGGATAAGGCATCCTAACTTGGTTCCTCTTCTGGGGTTTTACACTGGGCCAAGGGGTGAGAAGCTTCTTGTTCATCCCTTCTATAGACATGGGAATCTCACTCAATTCATAAGAGATGGAAATGGAGAGTGTTACAAATGGTCAAACATATGTAGAATATCCATTGGAATTGTCAAAGGATTGGAGCATCTTCACACATCACAGGAGAAGCCAATTATCCATGGAAACCTCAAGTCTAAAAATATCCTCTTGGACCGCTCCTACCAGCCCTACATCTCTGATTCTGGCTTACATCTTCTGCTGAATCCTACTGCTGGCCAAGAAATGCTTGAAAGTTCAGCAGCTCAGGGTTACAAGGCACCTGAGCTCATCAAAATGAAGGATGCTAGTGAGGAAAGTGATATATATAGCCTTGGTGTGATCTTGCTGGAACTGCTTTCAGGAAAGGAACCTATCAATGAGCACCCTACTCCTGATGAGGATTTCTATTTGCCAAATTTCATGAGAAATGCAGTCCTTGGACACAGAGTTGCTGATTTATACCACCCTGCCATTCTTCTCAGAAACAGCAGAGAGGATAGTATTCCAGTCACAGAAGAATTCATTCTCAAAGTTTTTCAACTTGCCATGGCTTGTTGCTCCCCTTCACCCTCAGTTAGACCTAACATAAAGCAAGTCCTCAAGAAACTTGAAGAAATTATGTTCTAG 1062 0.4331 MLILVLGLASATLLVIVAGYVLYCQRRVSGYESKDIESSEHKEEEVALKEDLMIFQGGEDLTICDILDAPGEVIGKSNYGTLYKALLQRSNKVRLLRFLRPVCTARGEELDELIQFLGRIRHPNLVPLLGFYTGPRGEKLLVHPFYRHGNLTQFIRDGNGECYKWSNICRISIGIVKGLEHLHTSQEKPIIHGNLKSKNILLDRSYQPYISDSGLHLLLNPTAGQEMLESSAAQGYKAPELIKMKDASEESDIYSLGVILLELLSGKEPINEHPTPDEDFYLPNFMRNAVLGHRVADLYHPAILLRNSREDSIPVTEEFILKVFQLAMACCSPSPSVRPNIKQVLKKLEEIMF* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1892 353 SUPERFAMILY Protein kinase-like (PK-like) 71 349 IPR011009 -
Pvu11g1892 353 Gene3D Transferase(Phosphotransferase) domain 1 147 353 - -
Pvu11g1892 353 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 3 351 - -
Pvu11g1892 353 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 3 351 - -
Pvu11g1892 353 Gene3D Phosphorylase Kinase; domain 1 62 145 - -
Pvu11g1892 353 Pfam Protein tyrosine and serine/threonine kinase 72 348 IPR001245 GO:0004672|GO:0006468
Pvu11g1892 353 ProSiteProfiles Protein kinase domain profile. 68 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1892 Pvu-Chr11 45828978 45832731 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1892 35 351 Carbohydrate Esterase AT5G61570 60.923 5.71e-136 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pvu11g1892 PK_Tyr_Ser-Thr 1.1e-30 CL0016