Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1891 AGGGACACAGTGAGAGCAGCTTCAGAATTTGCATCAAGAAACCATCTGCCACATCATATACAGGAACAGATGTTGTCACACTTGTGTTTGAAGTTCAAGACAGAAGGACTGAAGCAGCAAGAGACACTGAATAGCATGCCAAAGGGAATTCGTGCAAGCATTGCACACCAACTGTTTTTCCCTGTTCTGCAGAGGCTCTACCTCTTCCAAGGAGTTTCAGATGATTTTCTCTTCCAACTGGTTACAGAGATGGATGCTGAGTATTTCCCACCAAAGGAAGATGTGATACTACAAAATGAGTCTCCCACAGACCTCTACATACTGGTTTCAGGAGCAGTGGATCTCATTCGCTGTGTTGATGGCAATGAACAAGTTCTGAAGACGGCTAAGGCAGAGGACACATTTGGAGAGATTGGAGTGTTGTACTGTAGACCACAGCCTTTCACTGTTCGGACCACTGAGCTTTCTCAAATTTTAAGACTCAGCAGAACTTCCTTAATGAACTACTTACATGCATATCCACAAGCTGCACAGATCATAATGAAAAACATCTTCATGAGGTTAAAGGGGCATGAAGGCTTGGATTTTGAATATTCACCAAGAGACCCCCAAATGCATCAAGAGATGGATAACACAGGTGGAGGTTTTCCTGATTCATCTACAAATAATTCTGATGGGGAAACCAGATTGCATAACATGGTTCCTGAGGATGGAAAAGGAGATCTTCATGCTAATTTTCACAAAGATCATCCTGAAATGGAAGAAAATGAAAAGAACCAAGGCCCTATAAGATGGAAACAGAAGTCTGTTGTAGATCAGCAACAAAACAAGAGCCTTTCTGAGCTTGCAATTAACCATGAAAATAGGAAGATATTAGATGAACATATCATAGACTTTTTGGAGCCAGAAATCCCTTTCAACTACCCTTTAGGAAAAATATACTCAACCCCTTATTCAAGTACTTCTATCCACAAAACTCAGAGAGAAACAGAAAAATTCTTCAAAAAAAGAGTCACCATCCACTGTCTTAGCAAACACAAAACTACCTTACAGGAACATGGAAAGTTGATAATCCTACCTGATTCATTAGAAGAGCTGCTCCATATTGCTGGAGAAAAATTTGGAGGCCCCAAGCCTACAAGGGTAATCACCACAGAGAATGCAGAGATAGATGATATTAGTGTGATTCGAGATGAGGATCATCTATTTTTTCTTTGCAGTGACACTGAAAGTTGA 1236 0.4061 RDTVRAASEFASRNHLPHHIQEQMLSHLCLKFKTEGLKQQETLNSMPKGIRASIAHQLFFPVLQRLYLFQGVSDDFLFQLVTEMDAEYFPPKEDVILQNESPTDLYILVSGAVDLIRCVDGNEQVLKTAKAEDTFGEIGVLYCRPQPFTVRTTELSQILRLSRTSLMNYLHAYPQAAQIIMKNIFMRLKGHEGLDFEYSPRDPQMHQEMDNTGGGFPDSSTNNSDGETRLHNMVPEDGKGDLHANFHKDHPEMEENEKNQGPIRWKQKSVVDQQQNKSLSELAINHENRKILDEHIIDFLEPEIPFNYPLGKIYSTPYSSTSIHKTQRETEKFFKKRVTIHCLSKHKTTLQEHGKLIILPDSLEELLHIAGEKFGGPKPTRVITTENAEIDDISVIRDEDHLFFLCSDTES* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1891 411 CDD CAP_ED 68 181 IPR000595 -
Pvu11g1891 411 ProSiteProfiles cAMP/cGMP binding motif profile. 68 187 IPR000595 -
Pvu11g1891 411 SUPERFAMILY cAMP-binding domain-like 2 188 IPR018490 -
Pvu11g1891 411 SMART cnmp_10 68 185 IPR000595 -
Pvu11g1891 411 Pfam KHA, dimerisation domain of potassium ion channel 336 404 IPR021789 -
Pvu11g1891 411 Gene3D Jelly Rolls 35 198 IPR014710 -
Pvu11g1891 411 Pfam Cyclic nucleotide-binding domain 88 171 IPR000595 -
Pvu11g1891 411 PANTHER INWARDLY RECTIFYING POTASSIUM CHANNEL SUBUNIT 1 231 - -
Pvu11g1891 411 PANTHER INWARDLY RECTIFYING POTASSIUM CHANNEL SUBUNIT 223 410 - -
Pvu11g1891 411 ProSiteProfiles KHA domain profile. 337 411 IPR021789 -
Pvu11g1891 411 PANTHER POTASSIUM CHANNEL AKT1 1 231 IPR045319 GO:0005249|GO:0006813
Pvu11g1891 411 PANTHER POTASSIUM CHANNEL AKT1 223 410 IPR045319 GO:0005249|GO:0006813
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1891 Pvu-Chr11 45820255 45822555 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1891 1 404 Ion Channels AT5G46240 48.894 3.14e-119 360