Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1890 ATGCCATTTTGCCGTGGCCAAAAGTTTTTCAAGAGGTTCTGCGTTGATGAGTTCCAAATGGCAAGTCTTCCATATAGCAGCTTTCTGTCTAATGATCTCTTGCCATCCCTTGGAGCCAGAATCAACCAAGAAACAAGGCTTAGAAGATGCACAGTTTCCCCTTTTGATCCACGTTACAGGGCATGGGAGATGCTACTTATTGTCCTTGTTGTTTACTCTGCATGGATTTGCCCCTTTGAGTTTGCCTTTCTCCCTGAAAAGCAAGGCACACTGTTCATCATAGACAACATTGTCAATGCCTTCTTTGCAATTGACATCGTTCTCACATTCTTTGTTGCATATCTTGATAACCATTCCTACCTTCTTGTTGATGAACCAAAGAAAATTGCATTAAGGTACATATCTACCTGGTTTGTCTTTGATATCTGCTCAACTGCACCATTTCAATCCATCAGCCTCCTATTCACTGATCACAGCAGTGAAATTGGGTTCAAAATTCTGAACATGCTTCGGTTGTGGCGCCTGAGACGTGTCAGTTCTCTGTTTGCAAGACTTGAGAAGGACATTCGCTTCAATTACTTCTGGACCAGGTGCTCCAAGCTCATTGCTGTGACATTGTTTGTTGTGCACTGTGCTGGATGCTTCAACTATCTGATTGCAGATAGGTACCCAGATGCGAAATCAACATGGATTGGTTCTGTGTATCCAAATTTCAAAGAAATGAGTCTCTGGGACAGATATGTGACTGCCATTTATTGGTCCATTGTAACTCTTACTACCACTGGCTATGGAGATTTGCATGCTGAAAACCCAAGGGAGATGCTCTTTTTCATCTTCTACATGTTGTTCAACTTGGGATTAACTTCATACATCATTGGAAACATGACAAACATAGTAGTTCATTGGACAAGCCGCACCAGAAATTTT 927 0.4186 MPFCRGQKFFKRFCVDEFQMASLPYSSFLSNDLLPSLGARINQETRLRRCTVSPFDPRYRAWEMLLIVLVVYSAWICPFEFAFLPEKQGTLFIIDNIVNAFFAIDIVLTFFVAYLDNHSYLLVDEPKKIALRYISTWFVFDICSTAPFQSISLLFTDHSSEIGFKILNMLRLWRLRRVSSLFARLEKDIRFNYFWTRCSKLIAVTLFVVHCAGCFNYLIADRYPDAKSTWIGSVYPNFKEMSLWDRYVTAIYWSIVTLTTTGYGDLHAENPREMLFFIFYMLFNLGLTSYIIGNMTNIVVHWTSRTRNF 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1890 309 PRINTS EAG/ELK/ERG potassium channel family signature 72 79 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pvu11g1890 309 PRINTS EAG/ELK/ERG potassium channel family signature 95 105 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pvu11g1890 309 PRINTS EAG/ELK/ERG potassium channel family signature 106 115 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pvu11g1890 309 PRINTS EAG/ELK/ERG potassium channel family signature 247 264 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pvu11g1890 309 PRINTS EAG/ELK/ERG potassium channel family signature 273 284 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pvu11g1890 309 PRINTS EAG/ELK/ERG potassium channel family signature 291 300 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pvu11g1890 309 SUPERFAMILY Voltage-gated potassium channels 54 299 - -
Pvu11g1890 309 Gene3D - 60 301 - -
Pvu11g1890 309 PANTHER POTASSIUM CHANNEL KAT1 1 309 - -
Pvu11g1890 309 PANTHER POTASSIUM CHANNEL AKT1 1 309 IPR045319 GO:0005249|GO:0006813
Pvu11g1890 309 Pfam Ion transport protein 60 306 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1890 Pvu-Chr11 45815385 45817791 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1890 7 309 Ion Channels AT5G46240 76.568 1.69e-179 510
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1890 11 45815385 45817791 Pvu11g1890 11 45815385 45817791 ECH