Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1889 ATGAGTGCTGAATTGATTAGTGGTGCTCTTGTGTCCACCTTCGTTGAGAGGACTATTGACAATTTGGCTTCTCATTTTGGGGACATATTTCGTGGGAAAAAAGCCAACAAGACGCAGCTAAGCAACTTGAAGGTGAAGCTGCTAGCTGTTCATGTTGTGGCTGATGATGCAGAACAGAAACAGTTCACAAATCCACATGTGAGAGATTGGCTTCTCCAAGCCAAAGATGTTGTGTTTGATGCAGAGGATCTCTTGGATGAAATAGATTGTGCACTCTCCAAAACCCAACTGGAAGCTCAGTTTCAAAGTGCTGCTAAAAAGGTGTGGAGTTCTCTCAAATCTTTTGTCAGTTTCTTTGAAAATCAAATTGAAACAAGGATTGAACAAGTCATTGAGGACTTAGAAGATCTTGCAACCCGCAGCCATGTTCTAGGTTTGAAAAAGGCTGATGATGTTGGGGTCAGATCAGGATGGGATAGTAAATTATCATCAACCTATTTGCCAAAAGAAAGTGATATCTATGGCAGAGAAGATGACAAACAATTTGTCTTTAAGTGGCTCACGTCTCACACTCACAACAACTTATCTGTACTTTCTATTGTGGGAATGGGAGGGGTGGGTAAGACCACTCTTGCCCAACATGTATTCAATGACCCAAGGATGGATGAGGCTAAATTTGATGTCAAAGTTTGGGTTTGTGTTTCAGATGAATTTGATGTTTTCAAGGTATCAAGAGCAATTCTGGAGGATGTTACTACATCTACCGATGACAGTAGAGGTATAGAGATGGTTCACAGAAGATTAAAAGAAAAATTGACGGGGAAAAAATTTCTTCTTATTTTGGATGATGTTTGGAATGAAAACCAATCTAAATGGGAAGAACTGCAAAAGCCCCTTGTTTTCGGAGCCCAAGGGAGTAGGATTCTTGTGACTACACGTAGTAAGGAAGTTGCTTCTATCATGCGGTCAGAAGAACACTCCCTAAAACAATTACAAGAAGATGATTGTTGGAAGTTGTTTTCTAAACATGCATTTCGGGATGATGATACTCAACCACATGCAGAGTGCAGAGAGATTGGCATGAAGATTGTTAAAAAATGTAATAGACTACCTCTTGCCTTGAAAACAATGGGAAGTCTCTTATACAACAAATCACTTGTTTCAGAATGGGAAATTGTGTTTCAAAGCGAAGTATGGGAATTTTCGAAAGAGCGTTCTGATATTATTCCTTCTTTAGCACTGAGCTATATCCACCTTCCTTCCCATCTCAAGGCATGTTTTGCTTTTTGTGCTCTATTCCCCAAGAATTATAAGTTTAAAAAGGAGTGCTTAATTCAGTTGTGGATAACTGAAAAATTCCTACATTGTCCTCAACATAGTAGGACTCCTGAAGATGTTTGCCAACAATACTTCAATGATTTACTATCAAGGTCCTTCTTCCAACAGTTAGGTGAAAAGAAAGAACTTTTTGTCATGCATGACCTTCTACATGATTTGGCAAAATATGTCGGTGGAGGCATATACTTCAGGTGCGAAGTTGGTCAACGAGAAAAGATGCAAAAGCTAACTCGTCATTTTTCAGTTGAACTTGGTCGCAATCAACATTTTGATGAGTTTGGAACTTTCTGTAATACAAAAAGGTTACGTACATTTATGCCAAAATCTAGGAGCCTAAATTATTTCTGGAGGTGGGGTATCAAAATGTCGATACATGAATTGTTCTCCAAGTTTAAGTTCTTACGTATCTTGTCTTTGTCTCATTGTTCTGACCTTCAAGAGTTACCTGACCTTGTTGGCAATCTTGAGTATCTTCGTTCCTTAGACCTTTCTCATACTGCAATAAAAATACTAAATGAAAAGATATGTTCACTCTCCCACTTGCAAATACTGAATTTGAACTATTGTAGACATTTGGGGGAGTTGCCCTCAAATTTGTATTTACTCACCAATTTGTGTCGCTTGGAACTTATACATACTAAAGTGAGAAAGGTGCCCCCACATATGGGAAAACTGAAGAATCTTAAAGTAGTATTGAATTCCTTTAATGTTGGCCATAGCAGGGAGTTGGGTATTCAACAGCTACGAGAGCTCAACCTTGATGGAAGTCTATCAATTGGGGAGCTGCAGAATATTGAGAATTCCATGCTTGCATTAGAAGTAGATTTGAAGAATAAAACACACCTTGTGGCGTTGACCTTGGGATGGGGATGGAATCGGAACTCTATAGATTCAAAAAAAGAAGAGGACGTAATTAAGAATCTGCAACCTTCCAAAAACATAAAGAAGTTGTCAATCATTAGATATGGTGGAAAACGATTTCCAAATTGGTTACATGAAAGTTTATTGTCGAATATGGTGTCCTTAATGTTGGATGGATGTGAATCTTGTCAATGTTTACCTCCCCTTGGACTTCTGCCATTTCTCAAGGTCTTGAAGATTATAAAACTTGATGGGATAGTGAGTATAGATGCTGATTTTCATGGGAACAATTCATCTTCGTTTAAGTCCCTTGAAACATTGGAGTTCTCCCATATGAGTCAATGGGAAAAGTGGGACTGCCAAGCTGTGACAGGTTCTTTTCTAGTTCTTCAAAATCTTTCCATAAAAAATTGTCCCAAGCTGAAAGGAGAGCTGTTAGAGCAAGTTGTTCCTCTGGAAACACTACACATTACAAAATGCCAACAACTTGAGGCTTCTGCTCCCAAGGCTTTAGATTTAGAGCTATCTGAGTGTGGAAAGCTGCAGTTGGATTGGGGTACAATGAAAAAACTCACAATGGGTGGTCCCAACATGGAAGCATCTTTGCTGGAAATTGTTGGGTCTAAGACTCTTGAACACTTGAAGATTTATTCACCCCTAAGGTTAATCCATGATGATTGTGTCTCTCTGTGGACCTTTCCACTGGATTTCTTCCCAACACTCAGGATGCTTCATCTTCATGGGTTTGTTAATCTACAAATGATTTCACAGTGTCTCATCCATAATCATTTGGAGTGTTTGGAAATCAGTAGTTGTCCTAAATTTGAATCATTGCCTGGAAACATGCATATGCTGCTTCCATCTCTCAAGTATCTATGCATACAAGACTGTCCAAGACTTGAGGCAATCCCTGATGGAGGTTTCCCATCAAATCTCCAGAAGTTGTGTATTGAAAAGGTGGATTCTGAATGTTTTCCACATGAAGGTTTGCTTCCACTCTCTCTTGCTTCTTTGACCATCCGTAGTTGTCCAAATCTAGAGAAACTGGACTACAAGGGTCTCCATCAACTCTCATCCCTTCAATCACTGACACTTTTTGATTGCCCCAACCTTCAACGCTTACCAGAGGAGGGTCTTCCCAAATCAATTTCAAGTCTTCAAATAAATGGTTGTCCTTTGGTGAAACAGAGTTTCCAGAAAGAAGGAGGCGAAGACTGGGAAAAGATTGCACACATTGAAGCCCTGTGTATATGGTAG 3456 0.3941 MSAELISGALVSTFVERTIDNLASHFGDIFRGKKANKTQLSNLKVKLLAVHVVADDAEQKQFTNPHVRDWLLQAKDVVFDAEDLLDEIDCALSKTQLEAQFQSAAKKVWSSLKSFVSFFENQIETRIEQVIEDLEDLATRSHVLGLKKADDVGVRSGWDSKLSSTYLPKESDIYGREDDKQFVFKWLTSHTHNNLSVLSIVGMGGVGKTTLAQHVFNDPRMDEAKFDVKVWVCVSDEFDVFKVSRAILEDVTTSTDDSRGIEMVHRRLKEKLTGKKFLLILDDVWNENQSKWEELQKPLVFGAQGSRILVTTRSKEVASIMRSEEHSLKQLQEDDCWKLFSKHAFRDDDTQPHAECREIGMKIVKKCNRLPLALKTMGSLLYNKSLVSEWEIVFQSEVWEFSKERSDIIPSLALSYIHLPSHLKACFAFCALFPKNYKFKKECLIQLWITEKFLHCPQHSRTPEDVCQQYFNDLLSRSFFQQLGEKKELFVMHDLLHDLAKYVGGGIYFRCEVGQREKMQKLTRHFSVELGRNQHFDEFGTFCNTKRLRTFMPKSRSLNYFWRWGIKMSIHELFSKFKFLRILSLSHCSDLQELPDLVGNLEYLRSLDLSHTAIKILNEKICSLSHLQILNLNYCRHLGELPSNLYLLTNLCRLELIHTKVRKVPPHMGKLKNLKVVLNSFNVGHSRELGIQQLRELNLDGSLSIGELQNIENSMLALEVDLKNKTHLVALTLGWGWNRNSIDSKKEEDVIKNLQPSKNIKKLSIIRYGGKRFPNWLHESLLSNMVSLMLDGCESCQCLPPLGLLPFLKVLKIIKLDGIVSIDADFHGNNSSSFKSLETLEFSHMSQWEKWDCQAVTGSFLVLQNLSIKNCPKLKGELLEQVVPLETLHITKCQQLEASAPKALDLELSECGKLQLDWGTMKKLTMGGPNMEASLLEIVGSKTLEHLKIYSPLRLIHDDCVSLWTFPLDFFPTLRMLHLHGFVNLQMISQCLIHNHLECLEISSCPKFESLPGNMHMLLPSLKYLCIQDCPRLEAIPDGGFPSNLQKLCIEKVDSECFPHEGLLPLSLASLTIRSCPNLEKLDYKGLHQLSSLQSLTLFDCPNLQRLPEEGLPKSISSLQINGCPLVKQSFQKEGGEDWEKIAHIEALCIW* 1152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1889 1151 PANTHER DISEASE RESISTANCE PROTEIN RP 23 1014 IPR044974 GO:0006952
Pvu11g1889 1151 Gene3D Ribonuclease Inhibitor 689 883 IPR032675 -
Pvu11g1889 1151 Gene3D Ribonuclease Inhibitor 506 685 IPR032675 -
Pvu11g1889 1151 Pfam Rx N-terminal domain 14 102 IPR041118 -
Pvu11g1889 1151 Gene3D Ribonuclease Inhibitor 901 1148 IPR032675 -
Pvu11g1889 1151 SUPERFAMILY RNI-like 831 1128 - -
Pvu11g1889 1151 CDD AAA 174 284 - -
Pvu11g1889 1151 Gene3D - 15 128 - -
Pvu11g1889 1151 SUPERFAMILY L domain-like 491 897 - -
Pvu11g1889 1151 Gene3D - 416 502 IPR036388 -
Pvu11g1889 1151 Gene3D - 330 415 IPR042197 -
Pvu11g1889 1151 Coils Coil 120 140 - -
Pvu11g1889 1151 PANTHER OS05G0414200 PROTEIN 23 1014 - -
Pvu11g1889 1151 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 430 IPR027417 -
Pvu11g1889 1151 Pfam NB-ARC domain 177 396 IPR002182 GO:0043531
Pvu11g1889 1151 Gene3D - 155 329 IPR027417 -
Pvu11g1889 1151 PRINTS Disease resistance protein signature 197 212 - -
Pvu11g1889 1151 PRINTS Disease resistance protein signature 271 285 - -
Pvu11g1889 1151 PRINTS Disease resistance protein signature 367 381 - -
Pvu11g1889 1151 PRINTS Disease resistance protein signature 575 591 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1889 Pvu-Chr11 45773645 45777319 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1889 194 394 WRKY Transcription Factor Family AT5G45050 27.778 3.15e-10 62.8