Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1888 ATGGCATTAGAACTTGTTAGTGGTGCTCTTCTTTCTGCTTTCCTTCAGGTTGCATTCGAGAAGCTTGCTTCTTCTCAAATTCTCGATTTCTTTCATGCAAGAGAGCTTGATCAAAAGCTGCTCAACAAGTTGGAAACCAAGCTGCACTCCATCCATTCTCTGGCTGATGATGCAGAGCGAAAGCAGTTCATGGATACACATGTCAGAAACTGGCTGCTTAAGGTCAAAGATGTTGTCCTTGATGCAGAGGATCTCTTAGATGATATACAAAAACTCTACACAAGCCAAGTTGATACTGAATCTGAATCTCAAACCTGTTCAGGCTGTACTTGCAAGGTACTCAATTTCTTCAAATCCTCTCCTATTAGTTCCCTTAACAAGGAAATTGAGTGTAGGATGGAACAAATCCTTGACGGCTTAGAATTTCTTTCAAGCCAAAAGGGTGATCTAGGATTAAAAACAGCTAGCGGTGTTGGATCTGGGTTGAGTAATGAACTGCCACAGAAATCACAAACAACATCGCTGGTTGATGGAACTGATATCTATGGTAGAGATGATGATAAATTACTGATCTTTGAATGGCTGACTTCTGACATCAACAATCGTAACCAGCCATCAATACTTTCTATTGTAGGAATGGGTGGAGGGGTTCACAGAAGATTGAAGGAAGAATTGAAGGGAAAGAAATTTCTTCTTGTTTTGGATGATGTTTGGAACGAAAACCAACCTAAATGGGAGGAAGTGCGGAAGCCTCTTGTTTTTGGGGCCCAAGGGAGTAGAATTCTTGTTACCACACGTAATAAGGAACAATTACAGGAAGATGATTGTTGGAAGTTGTTTGCTACACATGCATTTCGAGATGATGATACTCAACCAGATCCAGAGTGCAAGAAGATTGGCATGGAGATTGTTAAAAAATGTAAAGGACTACCTCTCGCGTTGAAAACAATGGGAAGTATGTTATACAACAAATCATCTGTTTCAGAATGGGAAACTGTGTTCCAAAGCGAAATATGGGAATTTTCGAAAGAGCGTTGTAATATTATACCTGCTTTAGCATTGAGCTATATCCACCTTCCTTCCCATCTGAAGGTATGCTTTGTTTATTGTGCCCTATTCCCCAAGGATTATGAGTTTAAAAAGGAGAATTTGATTCAGTTGTGGATGACAGAAAATTTCGGCCATTGTCGTCAACATAGTAGGACTCCAGAAGAAGTTTGCCAACAATACTTCAATGATCTACTATCAAGATCTTTCTTCCAACAATCAGATGAAAAGAAAGAAGTATTTTTCATGCATAACCTTCTACATGATTTGGCAAAATATGTCGGTGGAGGCATATACTTCAGGTGCGAACTTGATCAAACAGAAAAGATACAAAAAGTAACTCGTCATTTTTCATTTGAAATTGGTCACAATGAATATTTTGATGGGTTTGGAACTTTATGTAACACAAAAAGCTTACGTACATTTATGCCAAAAGCTAGGAGCACAATGATTTCTTTCTGGAGATGGGAAATGAAAATGTCAATACATGAATTGTTATCCAAGTTTAAGTTCTTACGTATCTTATCTCTGTCTCATTATTCTGACCTTCAAGAGTTACCTAACTCTGTTGGCAATCTTGAGCATCTTCGTTCCTTAGACCTCTCCCGTACTGCAATAAACAGAGTAACTGAAAAAATATGTTTACTCTCCCACTTGCAAATACTGAAGTTGAACTACTGTAGAGATTTGTGGGAGTTGCCCTCAAATTTGCATTTACTCACCAATTTGTGTCGCCTTGAATTTAAAAAGACAAATGTGAGTAAGATGCCACCGCATTTGGGAAAACTGCAGAATCTTAAAGTAGTAATGAATTCTTTTGATATTGGCCATAACAAGGAGTTGGGTATTCAACACCTAGGAGAGCTTAACCTTGTGGGAAGTCTATCAATTGAGAAGCTACAAAATGTTGAGAATTCGCTAGATGCATTAGAAGCAGATTTGAAGAATAAAACACACCTTGTGACGCTGAAGTTGCGATGGGAGGGGAATCGGAACTCTATTGATTCAAAGAAAGAAGAGGACGTAATTGAGAATCTGCAACCTTCCAAAAACTTAAAGAAGTTGTCAATCTTTGGCTATGGTGGGAAACAATTTCCAAAATGGTTACTAGAAAATTCATTGTGGAATATGACATCCTTAGTATTGGATGAATGTGAATCTTGCCAATGTTTACCTCCCCTTGGACTTTTGCCGTTTATCAAGGTATTGAAGATTAGAAAACTCAATGGGATAGTGATTATTGATGCTGATTTTCATGGGAACAACTCTTCTTCATTTACATCCCTTAAAGCATTGGAGTTCTTATCTCTAAGTCGATGGGAAAAGTGGGACTGTCAAGCTGTGACAGATGCTTTTCCACAGCAACTTATTCCTTTGGAAACACTACAAATTCAAGGTTGCCAACAACTTGAGGCTTCCTCTCCTAGGGCTCTAGATTTACAACTACGTGAATGTGGAAAGCTGCAGTTAGAGTGGGGTAGAACGAAAAGCCTCACAATGATAAGATCATTGCTGGAAACTGTTGGGTCATCTCCAACACATCTAGAAGAGCTAACACTCAGTTATTGTCTTAAATTTGAATCATTGCCTGGAAGCATGCATATGCTGCTTCCATCTCTGAGGAGCTTATGCATACAAGGTTGTTCAATACTTGAGTCATTCCCTGACAAAGGTTTCCCATCAAGTCTCAAGGTTCTGAAAATCATTAATTGCTCTAGACTTGTTGGCTCACTGAAAGGAGCTCTCACAGATAATTCTTCTTTGGAAACCTTGTGGATTATAGAACCGGATGTAGAATGTTTTCCAGATGAAGGTTTGCTTCCACTCTCTCTTCCTTCTCTAATCATCTCTAACTGTCCAAATCTAGAAAAACTGGACTGCAAGGGTCTCCATCAACTCTCATCCCTTCAGAATTTGTATCTTATAAGTTGCCTCAACCTCCAAAGCTTACCCGAGGAGGGTCTTCCAAAATCAATTTCAAAACTTAGAATTCGTGATTCACTGCGTTGCCAGAAAGAAGGAGATGAAGATTGGGAAAAGATTGCACACATTCAAGAACGATATATATCATGA 3120 0.3888 MALELVSGALLSAFLQVAFEKLASSQILDFFHARELDQKLLNKLETKLHSIHSLADDAERKQFMDTHVRNWLLKVKDVVLDAEDLLDDIQKLYTSQVDTESESQTCSGCTCKVLNFFKSSPISSLNKEIECRMEQILDGLEFLSSQKGDLGLKTASGVGSGLSNELPQKSQTTSLVDGTDIYGRDDDKLLIFEWLTSDINNRNQPSILSIVGMGGGVHRRLKEELKGKKFLLVLDDVWNENQPKWEEVRKPLVFGAQGSRILVTTRNKEQLQEDDCWKLFATHAFRDDDTQPDPECKKIGMEIVKKCKGLPLALKTMGSMLYNKSSVSEWETVFQSEIWEFSKERCNIIPALALSYIHLPSHLKVCFVYCALFPKDYEFKKENLIQLWMTENFGHCRQHSRTPEEVCQQYFNDLLSRSFFQQSDEKKEVFFMHNLLHDLAKYVGGGIYFRCELDQTEKIQKVTRHFSFEIGHNEYFDGFGTLCNTKSLRTFMPKARSTMISFWRWEMKMSIHELLSKFKFLRILSLSHYSDLQELPNSVGNLEHLRSLDLSRTAINRVTEKICLLSHLQILKLNYCRDLWELPSNLHLLTNLCRLEFKKTNVSKMPPHLGKLQNLKVVMNSFDIGHNKELGIQHLGELNLVGSLSIEKLQNVENSLDALEADLKNKTHLVTLKLRWEGNRNSIDSKKEEDVIENLQPSKNLKKLSIFGYGGKQFPKWLLENSLWNMTSLVLDECESCQCLPPLGLLPFIKVLKIRKLNGIVIIDADFHGNNSSSFTSLKALEFLSLSRWEKWDCQAVTDAFPQQLIPLETLQIQGCQQLEASSPRALDLQLRECGKLQLEWGRTKSLTMIRSLLETVGSSPTHLEELTLSYCLKFESLPGSMHMLLPSLRSLCIQGCSILESFPDKGFPSSLKVLKIINCSRLVGSLKGALTDNSSLETLWIIEPDVECFPDEGLLPLSLPSLIISNCPNLEKLDCKGLHQLSSLQNLYLISCLNLQSLPEEGLPKSISKLRIRDSLRCQKEGDEDWEKIAHIQERYIS* 1040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1888 1039 Coils Coil 41 61 - -
Pvu11g1888 1039 Gene3D - 355 442 IPR036388 -
Pvu11g1888 1039 Coils Coil 649 669 - -
Pvu11g1888 1039 Pfam Rx N-terminal domain 11 91 IPR041118 -
Pvu11g1888 1039 Gene3D Ribonuclease Inhibitor 829 1030 IPR032675 -
Pvu11g1888 1039 PANTHER OS05G0414200 PROTEIN 217 902 - -
Pvu11g1888 1039 PANTHER OS05G0414200 PROTEIN 13 215 - -
Pvu11g1888 1039 Pfam NB-ARC domain 217 337 IPR002182 GO:0043531
Pvu11g1888 1039 Gene3D - 274 354 IPR042197 -
Pvu11g1888 1039 Gene3D - 216 273 IPR027417 -
Pvu11g1888 1039 PANTHER DISEASE RESISTANCE PROTEIN RP 217 902 IPR044974 GO:0006952
Pvu11g1888 1039 PANTHER DISEASE RESISTANCE PROTEIN RP 13 215 IPR044974 GO:0006952
Pvu11g1888 1039 SUPERFAMILY L domain-like 432 824 - -
Pvu11g1888 1039 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 169 370 IPR027417 -
Pvu11g1888 1039 Gene3D Ribonuclease Inhibitor 472 828 IPR032675 -
Pvu11g1888 1039 SUPERFAMILY RNI-like 770 1015 - -
Pvu11g1888 1039 Gene3D - 16 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1888 Pvu-Chr11 45768112 45772034 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1888 509 615 Receptor kinase-like Gene Family AT3G28890 36.697 2.66e-07 52.8