Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1886 ATGGCTGAGCAACCAATGATGAGTGATGTTGCTTCTTCCTCAAACTCTTCTTCTATGGCGTCTTGTAAAAAATATGATGTTTTTCTAAGCTTTCGAGGTGAGGACACTCGCATGAACTTCACCAGCCATCTTCATGAGGCTTTGAAGCAAAAAAAAGTAAAAACATATATTGACTACCAGCTTGAGAAGGGAGATGAAATCTCACAAGGACTCATCAAAGCAATCGAAGATTCTCATGTATCGATTGTGATCATGTCAGAGAACTATGCTTCCTCAAAGTGGTGCCTAGAAGAACTGAGCAAGATTCTTGAATGCCAGAAAAACCAAGGACAAATTGTGATTCCAGTGTTTTACAACATAGACCCATCTCATGTGAGGAAGCAGACTGGGAGCTATGAACAAGCCTTTGTAAAGCATCAGGAAGACCTCAGGTGCAACAAATGGAGAGCTGCTCTCACTGAAGTAGCCAATTTATCTGGGTGGGATTCTCGAAACAGGACTGAATCTAAACTCCTTATGGACATTGTTGGAGACATTTTACGAAAACTGACTGCTAGATACCCAAATCAACTTAAAGGGCTGGTTGGAATTGAAGAAAATTATGAACAAATTGAATCATTACTAAGAATTGGGTCAAGAGAAGTTAGAATGCTTGGAATATGGGGCATGGGTGGCATAGGAAAGACTACCCTTGCTACTGCTTTGTATGCACAACTTTCTCCTGAGTTCGAAGGTGGTTGCTTCCTCACAAATGTAAGGGAAAATTCAAGTAGGCATGGTGGACTTGAAGCTTTACACAAAAAACTTTATACTGAGTTGTTAGATAATGAAAGTCATTGTTTTGATGCACCCCTTTTAGTACCCCAGTTTGTCATGCATAGGCTTGGACATAAAAAAGTCTTCATTGTATTGGATGATGTGGCTACCTATGAGCAATTGGAACATCTTATTGAAGATTATGGTTTGTTGGGACCAGGAAGCAGAGTCATTGTTACAACTAGAGACAAACAAATTTTTAGACCAAATGATGAGATATACGAGGTGAAGAAATTGAGTTTTCATCGGTCTCTCGAACTTTTCAGTTTGACTGTTTTTGAAGAAAAAACACCTAAACATGGACATGAAGATTTATCAAGAAGGGCAGTTTCCTATTGCAAAGGTATTCCTTTGGCTTTGAAAGTTCTAGGTGCAAGTTTACGTCGAAGAAGTAAAGAAGCATGGGAAAGTGAACTGAGAAAACTCAAAAAGATCTCAAATAAGGAAATCAATAATGTATTAAAATTAAGTTATGATGGCTTAGATCGTTCACAAAAGGACATCTTTCTAGATATTGCATGCTTCTTTAAAGGAAAAGATAGAGATTGGGTCACAAATCTATTGGAAGCTTGTGATTTCTTTGCAGCATCTGGAATAGAAGTTCTTTTAGATAAAGCTCTAGTAACAATTTCAGATTGCAATAGTATAGAAATGCACGATTTAATACAAGAAATGGGTCGAGAAATTGTTGATCAAGAATCTATTAAAGAGCCTGGAAGGCGAAGTCGATTGTGGAGACCGGAGGAAGTGCATGAAGTATTGAAACATAACTTGGGAACTGAAGTTGTTGAATGCATAACTTTAGATACGTGTAATCTAAACAGGGATCTAAATTTGAGCTCTAATTGCTTCGCAAAGATGGTTAGCTTGAGATTTCTTGACATACATTGTTCATTGTCGTCAACCCGATTTCATGTGTACCTTCCTAGTGGTCTGGAGTCACTTTCTGATAAACTGAGGTACTTTTATTGGGATGGATTTTGTCATGAGTCTTTGCCGTCTAACTTTCATGCAGAAGATCTTGTTGAGATTTACATGTGTCGTAGCAAGCTTAAAAAGCTTTGGGATGGTGTTCAGAACCTTGTGAACTTGGAGAAAATTTACCTTGAATCCTCTGGGAATCTGGTTGAGATTCCTGACTTATCTAAGGCCGAAAAACTTAGATCAATTGATCTCTCTTATTGTAAAAGCTTGCGTAAGCTCCACCCTTCCTTATCATCTCTCCCTAAGCTTACAATGTTGGAATTGAGTGGCTGTACAGAGATTGAAAACCTGAATGTTCATTCAAAATATCTGCAGAGGTTGTACCTCAAAGGTTGTTCATCTCTCAAGGAGTTCTCAGTGACATCACATGAAATGACGATTTTGGAGTTATCTTATACTGCTATATGTGCATTGCCATCATCAATTAAATATAATAGGAAACTTACTCAACTTTTGCTATATGGTTGTAACAATTTTGACTGCACTCAAGACAACACGAATCTATCATTGGTACAATCAGTCCCTAACATCATTGGCCACTTGTTCTGTTTAGAATATTTAGACTTAAGTGGAACTATTGTGGAGAATTTGCCTGAAAGCATAAAAAACCTTTCAATGATGACACTATTGAGGTTAAATGATTGCAGGAAACTGGTGTCTCTATCAGAGCTTCCACCATCCTTGAAAATTCTGACAGCCTATAACTGCACTTCTTTAGTCTTCAGTCAATTACTTGTTTTTGAACACATGTTACAGAATTGCACGCCCAGCTTATCCAAACAATATTACCCTAAGCAATTTGAGGGTGGATGTGTCGTTTTCCCTGGAGACCATATCAGGAATGACTGTGGATTTCATACTAGAGATAGTTCAATAACTATTCCTTATCTCTCACTACCTGAATTGTGTGGTTTCATCTGTTGTGTCATTGTTTCTGAGGGATCAGTAGAGGGACATTTTTCGTGTTCTATCTATCAAGATAGCAAACAAGTGGGAATGGACGAAGGCCAATTATTGCACACAACTTTAATATCAGATCACGTGGCATTTTTGTTTGTTGAAACATGTGACCATCTTAGTGAAATACCTTTTAAGTTTGAATTTAATTACAGTCAGAAAACTGAAAAAGTTATAATCAAAGAGTGTGGGGTCTTCCCAGTGTATGCCTCAGAATCAGGGTTGAAGTTGTTTGAATTGGAATCTATTACTCAAATCTTCAATGAGTCACAATCCAGAGCAATTGGAGATGGACTCACAGAGATTGGAGTTGATGGATCCAATAATGAAAATGGAAATGAAAATGAAACATGGCTGCGGGTTGTAAGATCTTCTAAGTCCTCAATCACTTGTTCCATCCTTCTTCCAATTTAA 3171 0.3778 MAEQPMMSDVASSSNSSSMASCKKYDVFLSFRGEDTRMNFTSHLHEALKQKKVKTYIDYQLEKGDEISQGLIKAIEDSHVSIVIMSENYASSKWCLEELSKILECQKNQGQIVIPVFYNIDPSHVRKQTGSYEQAFVKHQEDLRCNKWRAALTEVANLSGWDSRNRTESKLLMDIVGDILRKLTARYPNQLKGLVGIEENYEQIESLLRIGSREVRMLGIWGMGGIGKTTLATALYAQLSPEFEGGCFLTNVRENSSRHGGLEALHKKLYTELLDNESHCFDAPLLVPQFVMHRLGHKKVFIVLDDVATYEQLEHLIEDYGLLGPGSRVIVTTRDKQIFRPNDEIYEVKKLSFHRSLELFSLTVFEEKTPKHGHEDLSRRAVSYCKGIPLALKVLGASLRRRSKEAWESELRKLKKISNKEINNVLKLSYDGLDRSQKDIFLDIACFFKGKDRDWVTNLLEACDFFAASGIEVLLDKALVTISDCNSIEMHDLIQEMGREIVDQESIKEPGRRSRLWRPEEVHEVLKHNLGTEVVECITLDTCNLNRDLNLSSNCFAKMVSLRFLDIHCSLSSTRFHVYLPSGLESLSDKLRYFYWDGFCHESLPSNFHAEDLVEIYMCRSKLKKLWDGVQNLVNLEKIYLESSGNLVEIPDLSKAEKLRSIDLSYCKSLRKLHPSLSSLPKLTMLELSGCTEIENLNVHSKYLQRLYLKGCSSLKEFSVTSHEMTILELSYTAICALPSSIKYNRKLTQLLLYGCNNFDCTQDNTNLSLVQSVPNIIGHLFCLEYLDLSGTIVENLPESIKNLSMMTLLRLNDCRKLVSLSELPPSLKILTAYNCTSLVFSQLLVFEHMLQNCTPSLSKQYYPKQFEGGCVVFPGDHIRNDCGFHTRDSSITIPYLSLPELCGFICCVIVSEGSVEGHFSCSIYQDSKQVGMDEGQLLHTTLISDHVAFLFVETCDHLSEIPFKFEFNYSQKTEKVIIKECGVFPVYASESGLKLFELESITQIFNESQSRAIGDGLTEIGVDGSNNENGNENETWLRVVRSSKSSITCSILLPI* 1057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1886 1056 Pfam TIR domain 24 194 IPR000157 GO:0007165
Pvu11g1886 1056 ProSiteProfiles TIR domain profile. 23 183 IPR000157 GO:0007165
Pvu11g1886 1056 SUPERFAMILY L domain-like 490 840 - -
Pvu11g1886 1056 PRINTS Disease resistance protein signature 217 232 - -
Pvu11g1886 1056 PRINTS Disease resistance protein signature 294 308 - -
Pvu11g1886 1056 PRINTS Disease resistance protein signature 385 399 - -
Pvu11g1886 1056 PRINTS Disease resistance protein signature 678 694 - -
Pvu11g1886 1056 Gene3D Ribonuclease Inhibitor 519 723 IPR032675 -
Pvu11g1886 1056 Gene3D - 351 434 IPR042197 -
Pvu11g1886 1056 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 1012 IPR044974 GO:0006952
Pvu11g1886 1056 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 444 IPR027417 -
Pvu11g1886 1056 SMART till_3 24 158 IPR000157 GO:0007165
Pvu11g1886 1056 Pfam NB-ARC domain 204 426 IPR002182 GO:0043531
Pvu11g1886 1056 Gene3D Ribonuclease Inhibitor 724 865 IPR032675 -
Pvu11g1886 1056 Gene3D - 21 185 IPR035897 -
Pvu11g1886 1056 Pfam Leucine Rich Repeat 612 631 IPR011713 -
Pvu11g1886 1056 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 17 1012 - -
Pvu11g1886 1056 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 161 IPR035897 -
Pvu11g1886 1056 Gene3D - 186 345 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1886 Pvu-Chr11 45753810 45758260 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1886 19 835 WRKY Transcription Factor Family AT4G12020 33.935 3.54e-116 393