Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1883 ATGGGCGTGGTGATAATCGACGGCACCACCGTGCGCGACTTCGTCAACGACGCCGCCGCGTTCACGAAGAGCGTGGACGAGCAGTTCACGGCGCTGGACCTCAACAAAGACGGCGTCCTGTCGCGGTCGGAGCTTCGCACGGCGTTCGAGTCCATGCGACTCATCGAGACGCACTTCGGCATCGACGTGGCCACTCCGCCGGAGAATCTCGCGACGTTCTACGACTCCATCTTCGACAAGTTCGACGGCGACCGGAGCGGTGCCGTGGACCGCCACGAGTTCCGAGAGGAGATGAAGAAGATCATGCTCGCCATCGCCGACGGCCTCGGCTCCTTCCCTATCCGCATGGTCCTCGAAGACGACCCCAATAGTCTCCTCCAGAAAGCCGCGGATCTCGAAGCTTCCAAGATCTGA 414 0.6184 MGVVIIDGTTVRDFVNDAAAFTKSVDEQFTALDLNKDGVLSRSELRTAFESMRLIETHFGIDVATPPENLATFYDSIFDKFDGDRSGAVDRHEFREEMKKIMLAIADGLGSFPIRMVLEDDPNSLLQKAADLEASKI* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1883 137 Pfam EF-hand domain pair 28 99 IPR002048 GO:0005509
Pvu11g1883 137 ProSitePatterns EF-hand calcium-binding domain. 82 94 IPR018247 -
Pvu11g1883 137 SUPERFAMILY EF-hand 12 103 IPR011992 -
Pvu11g1883 137 Gene3D - 9 106 - -
Pvu11g1883 137 PANTHER CALCIUM-BINDING EF-HAND FAMILY PROTEIN 1 137 - -
Pvu11g1883 137 ProSiteProfiles EF-hand calcium-binding domain profile. 20 55 IPR002048 GO:0005509
Pvu11g1883 137 ProSiteProfiles EF-hand calcium-binding domain profile. 69 104 IPR002048 GO:0005509
Pvu11g1883 137 SMART efh_1 73 101 IPR002048 GO:0005509
Pvu11g1883 137 SMART efh_1 24 52 IPR002048 GO:0005509
Pvu11g1883 137 ProSitePatterns EF-hand calcium-binding domain. 33 45 IPR018247 -
Pvu11g1883 137 PANTHER CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED 1 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1883 Pvu-Chr11 45724922 45725669 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1883 1 137 EF-hand Containing Proteins AT2G44310 72.263 3.42e-69 203