Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1882 ATGTTCTACCAGAAGAAAGGAAAAGCCATGGCACAGTTGTTGTTGGCAGCAACAATGGTGGTTGGCATTGCAATGGGAGATTCATCGAAGGAGAAAGAGGAATGCACACAGCAATTGGTAGGGCTAGCAACATGTTTGCCCTATGTTGGAGGTCAAGCACATGCTCCAACTCCAGATTGCTGCAGTGGTCTGAAGGAACTGCTGAAGAACAACAAAAAGTGTTTGTGTGTGATTATCAAAGATCGCAATGATCCTGACTTGAGTGGTTTGCAGATTAATGTCACTTTGGCTTTGAACCTCCCCACTGCTTGCAATTCCCCTGTCAATGTTTCCAAGTGCCCTGAACTCTTGCACATGGATCCCAAATCACAAGAGGCTCAAGTTTTTTATCAATTGGAGAAAGGCTCTAGCAAAAATGGCACAAGTCCTGCACCAAGTTCTTCAGCTGCAGTTGGAGCAAATACTTCAAGCAACCAGACAACCAGTACCCCACAGAAGAATGATGCATTCTGCAAAGAAAATAGATTTTTTAGGTTAAATGTTTTGCTTATTGGGCTTCAAGTTTGGGCTTTAACTGGGCTTTTGTGCTGA 591 0.4365 MFYQKKGKAMAQLLLAATMVVGIAMGDSSKEKEECTQQLVGLATCLPYVGGQAHAPTPDCCSGLKELLKNNKKCLCVIIKDRNDPDLSGLQINVTLALNLPTACNSPVNVSKCPELLHMDPKSQEAQVFYQLEKGSSKNGTSPAPSSSAAVGANTSSNQTTSTPQKNDAFCKENRFFRLNVLLIGLQVWALTGLLC* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1882 196 CDD AAI_LTSS 42 105 - -
Pvu11g1882 196 PRINTS Plant phospholipid transfer protein signature 34 50 IPR000528 GO:0006869|GO:0008289
Pvu11g1882 196 PRINTS Plant phospholipid transfer protein signature 55 69 IPR000528 GO:0006869|GO:0008289
Pvu11g1882 196 PRINTS Plant phospholipid transfer protein signature 91 108 IPR000528 GO:0006869|GO:0008289
Pvu11g1882 196 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 34 114 IPR036312 -
Pvu11g1882 196 SMART aai_6 35 113 IPR016140 -
Pvu11g1882 196 MobiDBLite consensus disorder prediction 134 166 - -
Pvu11g1882 196 Pfam Probable lipid transfer 16 113 IPR016140 -
Pvu11g1882 196 Gene3D - 32 112 IPR036312 -
Pvu11g1882 196 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 13 185 IPR043325 -
Pvu11g1882 196 PANTHER PROTEIN YLS3 13 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1882 Pvu-Chr11 45716118 45717869 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1882 27 195 Acyl Lipid Metabolism Gene Families AT2G44300 53.073 1.51e-60 186