Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1876 ATGTGCAGCTCCAAGAACAAAGTGACTGTAGGCATAAAAGCCACAGCCACAGCCAAATATCCTGAGGCCAGAATCAATGGCAGGCCAGTTCTGCAACCTACTTGCAACCGAGTTCCTAACCTTGAGAGGAGAAATTCAATCAAGAAAGTGTCACCAAAATCACCTTTTCCACCATCACCACCACTTCCAATCAAGACCTCATTGACACCTCCTGTTTCTCCAAAGTCTGAGTCCCCTAGGCCTCCACCTATAAAGAGAGGTAATGATAGTAATGGACTGAACTCAAGTTCTGAAAAGATTGTGACCCCAAGACACACCATCAAAACTCCAACTCTAGAGAGGAAAAAGTCTAAGAGTTTTAAGGAAGGATCATGTTGCACTTTGGTTTCTTCTGCCTCCATAGAGGCATCATTAAGCTACTCTTCCACTCTGATCACTGAATCCCCAGGGAGCATAGCTGCAGTGAGGAGGGAACAGATGGCATTGCAGCATGCACAGAGAAAAATGAAGATTGCCCATTATGGAAGATCAAAGTCTGCAAAGTTTGAAAAAGTTGTTCCTCTTGATATTTCAACCAATCTTACATCGAAGACATGTGAGGAGGAGAAGAGATGCAGCTTTATTACAGCTAATTCAGATCCCGTCTATATTGCTTATCATGATGAAGAATGGGGAGTTCCAGTTCATGATGACAAGATGTTGTTTGAACTTCTAGTTGTAAGTGGTGCACAGGTTGGATCAGATTGGACCTCAATCTTGAAGAAACGTCAGGATTTCAGGACTGCATTTTCAGAATTTGATGCAGCAACCTTGGCCAACATGACTGATAAGCAAATGGTATCTATTAGTTTGGAATATGGAATTGATATAAGCAGAGTTCGAGGTGTTGTTGACAATGCTAACAGAATTTCAGAGATTAACAAGGACTTTGGTTCATTTGACAAGTACATTTGGGGTTTTGTCAATCACAAACCCATCTCCACGCAATACAAGTTTGGCCACAAGATCCCAGTGAAGACATCAAAGTCAGATAGCATAAGCAAAGACATGCTCAGGAGAGGCTTTAGGTTTGTAGGTCCAACAGTTCTTCACTCATTTATGCAAGCAGCTGGGCTCACCAATGACCACTTAATCACTTGCCATAGACACTTGCAATGCACCAGAGAGTCCTCCCTATAG 1179 0.4258 MCSSKNKVTVGIKATATAKYPEARINGRPVLQPTCNRVPNLERRNSIKKVSPKSPFPPSPPLPIKTSLTPPVSPKSESPRPPPIKRGNDSNGLNSSSEKIVTPRHTIKTPTLERKKSKSFKEGSCCTLVSSASIEASLSYSSTLITESPGSIAAVRREQMALQHAQRKMKIAHYGRSKSAKFEKVVPLDISTNLTSKTCEEEKRCSFITANSDPVYIAYHDEEWGVPVHDDKMLFELLVVSGAQVGSDWTSILKKRQDFRTAFSEFDAATLANMTDKQMVSISLEYGIDISRVRGVVDNANRISEINKDFGSFDKYIWGFVNHKPISTQYKFGHKIPVKTSKSDSISKDMLRRGFRFVGPTVLHSFMQAAGLTNDHLITCHRHLQCTRESSL* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1876 392 MobiDBLite consensus disorder prediction 88 104 - -
Pvu11g1876 392 MobiDBLite consensus disorder prediction 1 115 - -
Pvu11g1876 392 Gene3D Hypothetical protein; domain 2 202 384 - -
Pvu11g1876 392 PANTHER DNA-3-METHYLADENINE GLYCOSYLASE I 1 390 - -
Pvu11g1876 392 SUPERFAMILY DNA-glycosylase 203 386 IPR011257 GO:0003824|GO:0006281
Pvu11g1876 392 MobiDBLite consensus disorder prediction 53 81 - -
Pvu11g1876 392 PANTHER OS04G0501200 PROTEIN 1 390 - -
Pvu11g1876 392 Pfam Methyladenine glycosylase 210 383 IPR005019 GO:0006284|GO:0008725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1876 Pvu-Chr11 45648820 45651616 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1876 11 45648820 45651616 Pvu11g1876 11 45648820 45651616 ECH
Pvu5g0476 5 4932895 4935784 Pvu11g1876 11 45648820 45651616 PCT