Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1870 ATGCATAACCACCACATCGGAGAAGACAACTCTCACCTCTCTTCTGAGGATGCCACTTCAACCCCAACTCACCAAAACCCATCCCAAACCCATTTCTCAATTCAGGTTTCTCCCTCCTCTCCCCATCCACTGCCACCAAACTCACCAAAAACTCCCTTTTACCATGAACGCTTCTCCGACAACCCATCTCAAACCTCGCCCCGCAAGAGAATACCCCTCATCACCCTCCCTTGCCGTCACTTTCCGACACCCTTTGGCGCAAAGTTTCCAACTTCGAAGCTTCTCCCTCGCTTCCGTTTCCTCATCTTCCTCCCCCTTCCCTCCCTCTACTTTCTCCTTTCAAACCCTGCCCCTTTCGATTTCTTCTGCGTGATTGCTTTCTCAGCAGCTCTGTTGATTTCCCTCAATCTGGCACTGTTGCTGTTCACTCGATTGTTCCCCGCCAAATTCTCGTCATCGTCTTCTTCTGCTTCTTCTTCCTCCCCTTCTGCTCACCCTGTGGTGTGGTCTATTGGGTCGAACCCTAAGCAAGTGAAGAGCACGAGTTGGGGGTGTTGGGTGCAAGTTTACAGCAATGGGGATGTCTACGAGGGTGAATTTCAGGAGGGGAAGTGTTGGGGGAGTGGGGTTTATCACTATCACATGAGTGGGAGGTATGAGGGTGATTGGGTTGATGGGAAGTATGATGGGTATGGTGTTGAGACATGGGCAAGGGGGAGCAGGTATAGAGGGCAGTATAGGAAGGGTTTGAGGCATGGAATGGGGATCTACAGGTTCTACAGTGGTGATGTGTATGGTGGTGAGTGGTCTAATGGGCAGTGTCATGGCTTTGGAGTCCACACTTGCAGTGATGGGAGTCGCTATGTTGGGGAGTTCAAATGGGGTGTCAAACATGGACATGCACAGTACCATTTCAGAAATGGGGACGTGTACGCTGGTGAATATTTTGCAGACAAGATGCATGGTTTTGGAGTGTATCAATTTCAGAATGGCCATCAGTATGAGGGGGCATGGCATGAAGGAAGAAGACAAGGACTGGGAATTTACACTTTCAGAAACGGGGAAACACAATGTGGTCATTGGCAGAATGGGATTCTTGATGATCCTAAGAGACATAATAGTCCTAATGGTTCTCCATGTGATGTGGACTATGCCAAGGTTTCCAATGCAGTACAGGATGCTCATTCTGCTGCTGAGAAAGCTTACAACATGGCAAAGGTGGAGGACAGGATGAATACAGTAGTGGCAGCAGCTAATAAAGCAGCCAACACAGCCAGAGTTGCAGCTGTTAAAGCTGAGCAAAATAGGATGCACCATAACTATAATAATAATGGTAAATGA 1341 0.4855 MHNHHIGEDNSHLSSEDATSTPTHQNPSQTHFSIQVSPSSPHPLPPNSPKTPFYHERFSDNPSQTSPRKRIPLITLPCRHFPTPFGAKFPTSKLLPRFRFLIFLPLPSLYFLLSNPAPFDFFCVIAFSAALLISLNLALLLFTRLFPAKFSSSSSSASSSSPSAHPVVWSIGSNPKQVKSTSWGCWVQVYSNGDVYEGEFQEGKCWGSGVYHYHMSGRYEGDWVDGKYDGYGVETWARGSRYRGQYRKGLRHGMGIYRFYSGDVYGGEWSNGQCHGFGVHTCSDGSRYVGEFKWGVKHGHAQYHFRNGDVYAGEYFADKMHGFGVYQFQNGHQYEGAWHEGRRQGLGIYTFRNGETQCGHWQNGILDDPKRHNSPNGSPCDVDYAKVSNAVQDAHSAAEKAYNMAKVEDRMNTVVAAANKAANTARVAAVKAEQNRMHHNYNNNGK* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1870 446 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 260 378 - -
Pvu11g1870 446 SMART morn 309 330 IPR003409 -
Pvu11g1870 446 SMART morn 286 307 IPR003409 -
Pvu11g1870 446 SMART morn 240 261 IPR003409 -
Pvu11g1870 446 SMART morn 194 215 IPR003409 -
Pvu11g1870 446 SMART morn 263 284 IPR003409 -
Pvu11g1870 446 SMART morn 332 353 IPR003409 -
Pvu11g1870 446 SMART morn 217 238 IPR003409 -
Pvu11g1870 446 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 22 439 - -
Pvu11g1870 446 Pfam MORN repeat 288 310 IPR003409 -
Pvu11g1870 446 Pfam MORN repeat 267 287 IPR003409 -
Pvu11g1870 446 Pfam MORN repeat 311 332 IPR003409 -
Pvu11g1870 446 Pfam MORN repeat 219 241 IPR003409 -
Pvu11g1870 446 Pfam MORN repeat 242 264 IPR003409 -
Pvu11g1870 446 Pfam MORN repeat 334 355 IPR003409 -
Pvu11g1870 446 Pfam MORN repeat 196 214 IPR003409 -
Pvu11g1870 446 MobiDBLite consensus disorder prediction 13 38 - -
Pvu11g1870 446 MobiDBLite consensus disorder prediction 1 69 - -
Pvu11g1870 446 Gene3D - 178 225 - -
Pvu11g1870 446 Gene3D - 226 270 - -
Pvu11g1870 446 Gene3D - 317 380 - -
Pvu11g1870 446 Gene3D - 271 316 - -
Pvu11g1870 446 PANTHER MORN REPEAT PROTEIN 22 439 - -
Pvu11g1870 446 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 190 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1870 Pvu-Chr11 45552649 45555580 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1870 188 384 Acyl Lipid Metabolism Gene Families AT2G41210 33.500 1.09e-27 114