Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1862 ATGTCTTCGTCCACCGCTGGAGGTGCTGGATCCAATGATTCCAATGCTGCCCGGAGACAAAGCAAGAGACCCAAGTACTCAAAGTTTACACAACAAGAACTACCAGCGTGCAAGCCTATTCTAACACCACGAGCAGTTATTTCAGCATTCTTGATTGTCACCATTGTGTTCATTCCCATCGGAGTTGCTTCGTTGATTGCTTCGCATGATGTTGTTGAAATTATTGATAGGTATGACTCGCAGTGCATTCCGGCAAATGTAACAGACAAGGTGTCATACATTCAGACTCCTGGAGAAAAGCCATGCAACAGGGAGCTACATGTGGACAAGCATATGAAGTCTCCTATCTATGTGTACTACCAGCTTGACAACTTTTACCAGAATCATCGGCGGTATGTTAAAAGCCGAAATGATGAGCAGCTGAGGGATTCTAAAAATGAAAACTCAACAAGTGGTTGTGATCCTGAGAATCAGGCAAATGGAATGCCAATTGTACCCTGTGGTCTTATAGCTTGGAGCTTGTTCAACGATACATACAGCTTCTCACGCAACAGCGTTAATTTGACTGTGAACAAGACAGAAATCTCATGGAAAAGTGATAGGGATCACAAATTTGGAAGTGATGTTTTTCCTAAAAATTTCCAAAATGGTTCTTTAGTAGGCGGTGGTCATCTCGATGAACACACACCTTTGAGTCAGCAAGAGGATCTTATTGTTTGGATGCGGACTGCAGCTTTGCCAACTTTTAGGAAGTTGTATGGAAGGATTGAGGTGGATTTGCAGAAAGGTGATGTCATACAAGTGGATTTGAAAAATAACTACAACACATACAGTTTTAATGGCAAGAAGAAGCTTGTTCTGTCTACTACTTCCTGGCTCGGTGGGAAGAATGACTTCCTTGGCATTGCTTATCTAACTGTTGGAGGATTGAGCTTCTTTCTGTCCATGGCCTTTACTGTTGTATATCTTGTCAAGCCAAGGCAACTTGGAGATCCCTCTTATCTGTCATGGAATAGGAACCCTGGAGGGCAATGA 1035 0.428 MSSSTAGGAGSNDSNAARRQSKRPKYSKFTQQELPACKPILTPRAVISAFLIVTIVFIPIGVASLIASHDVVEIIDRYDSQCIPANVTDKVSYIQTPGEKPCNRELHVDKHMKSPIYVYYQLDNFYQNHRRYVKSRNDEQLRDSKNENSTSGCDPENQANGMPIVPCGLIAWSLFNDTYSFSRNSVNLTVNKTEISWKSDRDHKFGSDVFPKNFQNGSLVGGGHLDEHTPLSQQEDLIVWMRTAALPTFRKLYGRIEVDLQKGDVIQVDLKNNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLSFFLSMAFTVVYLVKPRQLGDPSYLSWNRNPGGQ* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1862 344 MobiDBLite consensus disorder prediction 1 30 - -
Pvu11g1862 344 Pfam LEM3 (ligand-effect modulator 3) family / CDC50 family 65 328 IPR005045 GO:0016020
Pvu11g1862 344 MobiDBLite consensus disorder prediction 136 158 - -
Pvu11g1862 344 MobiDBLite consensus disorder prediction 1 17 - -
Pvu11g1862 344 PANTHER ALA-INTERACTING SUBUNIT 3 1 343 - -
Pvu11g1862 344 PIRSF Lem3/Cdc50 1 340 IPR005045 GO:0016020
Pvu11g1862 344 PANTHER CELL CYCLE CONTROL PROTEIN 50 1 343 IPR005045 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1862 Pvu-Chr11 45425064 45430078 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1862 11 45425064 45430078 Pvu11g1862 11 45425064 45430078 ECH
Pvu5g0501 5 5575654 5585042 Pvu11g1862 11 45425064 45430078 PCT