Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1860 ATGTTTTCACTACTAAAAGGGCGTGACTTTCTGATTCAAATTTCACTCGCTTCAACGGCTTTCTCTGCCTTTCTGCGGCATCGAAGCTCTGCAACACTTCAAACCAACACCTCAATGGTTTCTCTCACGGGAAAGACCAGACTGGGCTCAACTCGAGCCTCTGTGGTCGGTGCTGCCCAATCTCGGCCGAGCGTGGGTGGTAAGAATTTCAAGGTGTTTTCTGAAATTGACAGGACTAAAGCTGGTGACGGGAATACGACTTCTGCTAGAGGAACAGGTGCAAATCCAAGAAGGAGTACCGGGGTAGCTAGCAAAGGGGTTATTCTTAATAGTACCAGTAATCTAAAGGGTGGTCTCAAAAAGAGTATGGATAAAAGTAGTGGCAAATATGGTACTTCTTCAAATACAGCTGTCAGAAAGGCATTGGCTGATGTTAGCAATGTTCAAGAAAAATTCACTGCAGCTGTTGGACATACTAACTCAAAAATGAAGGTTTCAGCAGGTTCTAGTACCAAAATAGTGGGTGTATCTTTGAGGAAGTCCATCGTGGGAAGAGTGCAAAGAAATACAAGTAAAACTGATGTTCAGTTAGATTCTCTCAATAAAGATGATCAGAAGAATAATACAAAAGGAGGCCAGTCGGTTTTTTCCACAAAGGACAGGTTTACATGGAAGACTACAGCTACAAGTTCAAGGAAGTCTTTACCAGTACCAAGGAGGGTAATCAGAGAAGATACGAATAAAACAAAGGAAAATGTTAGAAGTTCCCAAACGGCAAAAGGCCAAAGTGGTCTTCCCTCTAAGACAACAACAAACAGAAGAGATAGTTCCCAACTGATTAATGCAAGAAGCCATTTATGGAAGAATCGAGTGAGTGATGGTTTTGTTCTAACGGTTCAGCCTAATGTTTTGCATGCATCCTCAAGGAAGTCTGCCAAGCCAATTGTTAAGACCATACTCAAGGCTTCCATTGCGCAAAGGACATCAAAATCTCAGTCCATATCAGCTCAGAGAAAATTAGAATCAACTATTGCAACTTCATCTCAGAACAAACCCATATCAGCTCAGAACAAATTAGAATCAACTAGTGCAACCTTATCTCAGGAAAAAGAAACAGTTTCTTTGTCTCTTCCTGGGAATGGTTCAACAGTTTCTGATGATGCAAATCAAAGACATCTTCATCTTCCATCTGGAGAGAGCAATCTAAGAACAGATTTTTCAGAGCTTATTCCAAGGAAAAAATCCAGCCGCCGAAAATCATATACAACTTCATTAATTGAGGGATCTAAGTTTCTCAAGGAAAGTGAAGTTAGAGAGCAAGATAACCTACCCAATATAGATAATAAAGGCAATCAACTTGAAGTTTCTGAATACATTGATGACATATATCAGTACTATTGGGTTACTGAGGCACGTAATCCAGCTCTAGCAAATTACATGTCAATTCAGACGGACATTACACCTAGTTTGCGGGGCATTTTGATCAACTGGCTAATTGAAGTACACTTCAAATTTGATCTGATGCCAGAAACACTGTATCTTACTGTTACGTTGCTTGATCAATATCTCTCCCTGGTGACTATCAAAAAGACTGATATGCAGTTAGTTGGTCTTACAGCACTTTTGCTGGCTTCAAAGTATGAGGATTTTTGGCATCCTAGGGTCAAAGATTTAATCAGCATCTCTGCTGGGTATACTAGAGATCAAATGCTTGGAATGGAAAAACTTATTCTTAGAAAATTAAAGTTCCGTCTCAATGCTCCTACTCATTATGTTTTTTTGGTGCGGTTTTTGAAGGCTGGACAATCAAATAAAAAGATTGAACACATGGCATTCTTTCTGGTTGACCTGTGCTTAGTTGAATACGACGCTTTAGCATTCAAGCCTTCATTACTTTCTGCATCAGCTCTGTATGCTGCACGGTGTACTTTGCAAATAACTCCACCATGGACCCCATTACTTCACAAGCATGCGCGTTATGAAGTTTCACAGCTCAGGGATTGTGCGGAAATGATTCTGAAGTTCCACAAAGCTGCTGGGGTTGGAAAGTTGACAGTTGCATATGAAAAGTACTCTAGACCAGAACTCGGTAAGGTTGCTGCAGTGAAACCTTTGGACGTTCTTCCCATGTGA 2133 0.4069 MFSLLKGRDFLIQISLASTAFSAFLRHRSSATLQTNTSMVSLTGKTRLGSTRASVVGAAQSRPSVGGKNFKVFSEIDRTKAGDGNTTSARGTGANPRRSTGVASKGVILNSTSNLKGGLKKSMDKSSGKYGTSSNTAVRKALADVSNVQEKFTAAVGHTNSKMKVSAGSSTKIVGVSLRKSIVGRVQRNTSKTDVQLDSLNKDDQKNNTKGGQSVFSTKDRFTWKTTATSSRKSLPVPRRVIREDTNKTKENVRSSQTAKGQSGLPSKTTTNRRDSSQLINARSHLWKNRVSDGFVLTVQPNVLHASSRKSAKPIVKTILKASIAQRTSKSQSISAQRKLESTIATSSQNKPISAQNKLESTSATLSQEKETVSLSLPGNGSTVSDDANQRHLHLPSGESNLRTDFSELIPRKKSSRRKSYTTSLIEGSKFLKESEVREQDNLPNIDNKGNQLEVSEYIDDIYQYYWVTEARNPALANYMSIQTDITPSLRGILINWLIEVHFKFDLMPETLYLTVTLLDQYLSLVTIKKTDMQLVGLTALLLASKYEDFWHPRVKDLISISAGYTRDQMLGMEKLILRKLKFRLNAPTHYVFLVRFLKAGQSNKKIEHMAFFLVDLCLVEYDALAFKPSLLSASALYAARCTLQITPPWTPLLHKHARYEVSQLRDCAEMILKFHKAAGVGKLTVAYEKYSRPELGKVAAVKPLDVLPM* 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1860 710 Gene3D - 581 708 - -
Pvu11g1860 710 SMART Cyclin_C_2 588 705 IPR004367 -
Pvu11g1860 710 CDD CYCLIN 586 673 IPR013763 -
Pvu11g1860 710 SUPERFAMILY Cyclin-like 588 707 IPR036915 -
Pvu11g1860 710 SMART cyclin_7 592 674 IPR013763 -
Pvu11g1860 710 SMART cyclin_7 496 579 IPR013763 -
Pvu11g1860 710 MobiDBLite consensus disorder prediction 114 134 - -
Pvu11g1860 710 Pfam Cyclin, N-terminal domain 461 586 IPR006671 -
Pvu11g1860 710 MobiDBLite consensus disorder prediction 206 234 - -
Pvu11g1860 710 Pfam Cyclin, C-terminal domain 588 703 IPR004367 -
Pvu11g1860 710 PANTHER CYCLIN-B3-1-RELATED 173 707 - -
Pvu11g1860 710 MobiDBLite consensus disorder prediction 252 276 - -
Pvu11g1860 710 PANTHER CYCLINS 173 707 IPR039361 -
Pvu11g1860 710 CDD CYCLIN 490 578 IPR013763 -
Pvu11g1860 710 MobiDBLite consensus disorder prediction 343 400 - -
Pvu11g1860 710 MobiDBLite consensus disorder prediction 81 102 - -
Pvu11g1860 710 Gene3D - 476 580 - -
Pvu11g1860 710 SUPERFAMILY Cyclin-like 450 586 IPR036915 -
Pvu11g1860 710 MobiDBLite consensus disorder prediction 187 276 - -
Pvu11g1860 710 MobiDBLite consensus disorder prediction 237 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1860 Pvu-Chr11 45403860 45414082 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1860 11 45403860 45414082 Pvu11g1860 11 45403860 45414082 ECH