Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1858 ATGTCGGAGAGTGGTAGAAGACACGGCGGCGCCGCCGCTGAGACCGGCCGAGGTGAGCAGCTTCTGGCGGAGGAGGCCTCCGGAGAGTTGTCATCACTGTCGTGGAGACTGAATGTGAAGGAGTTTCAGTTGCCACGGCCAAGTCCAACCCATCATCACCATAATAACCTTACTTGCTTCACTTTTCATGGTCTTTTTCCCAAACCCAAAAAGGAACGCAAGGTTGCAGAATACTACAAGAAACAGCAGAAGCTCCTTGAAGGGTATAATGACATGGATTCAATGACTGAAATGGGTTATTTCCCTGGAAGTCTCACTGAGGATGAAATGAAGCAGTTAGCAAGAAGTGAGAGACTGGCAGTGAATGTGTCAAATGCAGCTAACTTGGTGCTATTTGCAGCAAAGGTTTATACTTCCTTTGAGAGCAAATCATTAGCAGTCATAGCTTCCACCATGGATTCTCTCTTAGATCTCTTGTCTGGTTTCATATTGTGGTTCACTGCCTATGCCATGAGAAACCCAAACCAGTATCACTACCCCATTGGAAAGAAAAGGATGCAACCAGTGGGTATCATTGTTTTTGCATCTGCGATGGCAACTTTGGGATTGCAGATTTTGATTGAGTCTGGCAGACAAATCATTACGAAGTCTAAGCCTGAAATGGATCCCCAAGAGTTGAAATGGATGATTGGGATCATGGCATCTGTCACTGTAGTGAAGTTCATACTCATGATCTACTGCAGAAGGTTTAAGAATGAAATTGTGAGAGCTTATGCACAAGATCATTTTTTTGATGTTATTACTAACTCAGTTGGATTAGTTGCTGCTGTGCTTGCTGTGAAGTACTCTTGGTGGATTGATCCAATGGGAGCTATTATTATAGCATTGTACACAATTAACATATGGGCAAAGACAGTGATTGAGAATGTATGGTCTCTTATTGGAAGAACAGCACCACCAGATTTTCTAGCAAAGTTGACATATCTGATATGGAATCACCATGAAGAGGTGAAGCACATAGACACTGTGAGAGCATACACCTTTGGTGCTCATTACTTTGTTGAAGTAGATATTGTGTTGCCAGAAGACATGCCTCTCAATCAAGCACACAACATTGGTGAGACATTGCAGGAAAAATTGGAGCAACTTCCTCAAGTTGAAAGAGCTTTTGTTCACATTGATTTTGAGTTTACTCACAGACCTGAACATAAGATGATGGTATAA 1224 0.4257 MSESGRRHGGAAAETGRGEQLLAEEASGELSSLSWRLNVKEFQLPRPSPTHHHHNNLTCFTFHGLFPKPKKERKVAEYYKKQQKLLEGYNDMDSMTEMGYFPGSLTEDEMKQLARSERLAVNVSNAANLVLFAAKVYTSFESKSLAVIASTMDSLLDLLSGFILWFTAYAMRNPNQYHYPIGKKRMQPVGIIVFASAMATLGLQILIESGRQIITKSKPEMDPQELKWMIGIMASVTVVKFILMIYCRRFKNEIVRAYAQDHFFDVITNSVGLVAAVLAVKYSWWIDPMGAIIIALYTINIWAKTVIENVWSLIGRTAPPDFLAKLTYLIWNHHEEVKHIDTVRAYTFGAHYFVEVDIVLPEDMPLNQAHNIGETLQEKLEQLPQVERAFVHIDFEFTHRPEHKMMV* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1858 407 Pfam Cation efflux family 124 313 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Pvu11g1858 407 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 318 394 IPR036837 -
Pvu11g1858 407 TIGRFAM CDF: cation diffusion facilitator family transporter 122 394 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Pvu11g1858 407 PANTHER METAL TOLERANCE PROTEIN 9 25 407 - -
Pvu11g1858 407 MobiDBLite consensus disorder prediction 1 25 - -
Pvu11g1858 407 Gene3D Cation efflux protein, cytoplasmic domain 318 395 IPR036837 -
Pvu11g1858 407 SUPERFAMILY Cation efflux protein transmembrane domain-like 116 315 IPR027469 -
Pvu11g1858 407 Pfam Dimerisation domain of Zinc Transporter 320 394 IPR027470 -
Pvu11g1858 407 Gene3D Cation efflux protein transmembrane domain 119 313 IPR027469 -
Pvu11g1858 407 PANTHER MITOCHONDRIAL METAL TRANSPORTER 1-RELATED 25 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1858 Pvu-Chr11 45380928 45388352 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1858 11 45380928 45388352 Pvu11g1858 11 45380928 45388352 ECH
Pvu5g0510 5 5702444 5706126 Pvu11g1858 11 45380928 45388352 PCT