Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1857 ATAAGCATCTGCATTTGTCTGCAAAAGAAAACAATGAGTGAACAAAGAAATGTTCCATGTGGGTTGTGTAGGTATCAACATAAACGTCACGATCTTAGCTGTGAATTTGGTCAGTATTTTCCCATTAATAGGTTAAGAGAGATTGAGAGTGCTAGCAAGTTTTTTGGTATGGCCAATTTGCTGAGATTGATGCGTGGTGCTGAACCCTCTCAAAGACAAGTTATGGCTAATTCCATTCTAAGGGAGGCTCAAATGTGGGCCAATGATCCCATTCATGGTGCCCTAGGTCATATTCTTACTCTCAGCAGTCACATCAAATCTGTTGGAAGAGAGTTAAAACTTGTAAACGCCATGCTTGCTCATTGCTCACATCAAGCAACTCCACAAATTGCAACCACAGTTCAGGATAATCTTGTTGCTAGCTCTTCTAACCCAGCACAATCAAGTACTGTTGCATCTCAGGAGAAAGAGGGTGCTGCTGAGGAGAAAGATGCTGAGGTTAAGAGAAAGAATGGGAAAAGAAAACACTGA 531 0.4143 ISICICLQKKTMSEQRNVPCGLCRYQHKRHDLSCEFGQYFPINRLREIESASKFFGMANLLRLMRGAEPSQRQVMANSILREAQMWANDPIHGALGHILTLSSHIKSVGRELKLVNAMLAHCSHQATPQIATTVQDNLVASSSNPAQSSTVASQEKEGAAEEKDAEVKRKNGKRKH* 177
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1857 176 PANTHER LOB DOMAIN-CONTAINING PROTEIN 25-LIKE 17 166 - -
Pvu11g1857 176 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 17 166 - -
Pvu11g1857 176 Pfam Lateral organ boundaries (LOB) domain 19 115 IPR004883 -
Pvu11g1857 176 ProSiteProfiles LOB domain profile. 18 119 IPR004883 -
Pvu11g1857 176 MobiDBLite consensus disorder prediction 139 176 - -
Pvu11g1857 176 MobiDBLite consensus disorder prediction 139 155 - -
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1857 16 105 AS2 family AT2G19820 40.659 9.51e-20 78.6
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pvu11g1857 LOB 1.3e-21 No_clan