Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1854 ATGGCAGAGGAGTTGATTCTGTTGGATGACTGGCTCAGTATGTTTGGCATGAGAGCAAGGATTGCACTGGCAGAGAAGGAGATAGAGTATGAGTACAGGGAAGAGGATCTGAATAACAAGAGCCAACTGCTTCTGCAAATGAACCCAGTTCACAAGAAGATTCCAGTTCTCATCCATAATGGTAAACCCATTTCTGAGTCCATCATCATTGTTGAGTATATTGATGAGGTGTGGAAGAACAAAGCTTCTTTCTTACCCTCAGAACCTTATCAGAGAGCACAGGCCAGGTTCTGGGCTGATTTTGTCAACAAGAAGATTGGTGATGTTGGGGGAAGGATATGGGCTGGAAAGAGAGAAGAGATTGAGGCAGCAAAGAAGGAGTTGGTGGAGGGCTTGAAGGAATTGGAGAAGAATCTTGGAGAGAAGCCTTACTTTGGAGGTGACACATTTGGATTTGTTGACATTGCTCTCATCCCTTTCTCCACCTGGTTTTACAGTTATGAGGCATTGGGGAACTTCAAAGTGGAGGCAGAGTGTCCTAAGATCATTGCTTGGGCTAAGAGATGCAATGAGAGGGAGAGTGTTTCCAAATCTGTTGCTGATGAGAAGAAGGTCTATGAGTTTGTTGTGGACTTCAGAAAGAGCCATCAGTTGGACTGA 660 0.447 MAEELILLDDWLSMFGMRARIALAEKEIEYEYREEDLNNKSQLLLQMNPVHKKIPVLIHNGKPISESIIIVEYIDEVWKNKASFLPSEPYQRAQARFWADFVNKKIGDVGGRIWAGKREEIEAAKKELVEGLKELEKNLGEKPYFGGDTFGFVDIALIPFSTWFYSYEALGNFKVEAECPKIIAWAKRCNERESVSKSVADEKKVYEFVVDFRKSHQLD* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1854 219 SFLD Main.3: Omega- and Tau-like 2 216 IPR045073 -
Pvu11g1854 219 Coils Coil 118 138 - -
Pvu11g1854 219 Gene3D - 88 219 - -
Pvu11g1854 219 CDD GST_N_Tau 5 78 - -
Pvu11g1854 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 212 IPR010987 -
Pvu11g1854 219 SUPERFAMILY Thioredoxin-like 6 106 IPR036249 -
Pvu11g1854 219 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 212 IPR045073 -
Pvu11g1854 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Pvu11g1854 219 Gene3D Glutaredoxin 1 87 - -
Pvu11g1854 219 CDD GST_C_Tau 89 212 IPR045074 GO:0004364|GO:0006749
Pvu11g1854 219 Pfam Glutathione S-transferase, N-terminal domain 5 76 IPR004045 -
Pvu11g1854 219 SFLD Glutathione Transferase (cytosolic) 2 216 IPR040079 -
Pvu11g1854 219 Pfam Glutathione S-transferase, C-terminal domain 119 188 - -
Pvu11g1854 219 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 4 212 - -
Pvu11g1854 219 SUPERFAMILY GST C-terminal domain-like 76 214 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1854 Pvu-Chr11 45351233 45352724 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1854 1 214 Glutathione S-transferase Gene Family AT1G78380 66.355 1.42e-103 296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0549 5 6907607 6911347 Pvu11g1854 11 45351233 45352724 PCT
Pvu11g1854 11 45351233 45352724 Pvu5g0550 5 6913468 6914609 PCT