Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1843 ATGGAACTCTCCGTTAATCCTCTTCACATTTTCTCATCACAACCACTCTCTCTAAACCCTAATGTTTTCACGCTCACACCACCGCCTCCCCGCAGAAAGCTTCGGTTCCGAGTTTCGGCCACCGCCGAGCCCGATGGGGCGTCGTGGTCGCACTCGCTGCGGCGTGGGTCGCGGCGGTTCTGGCTCAAGTTTGGGGAAATGGTGAAGAAAGAGACGGGTCTCGACTTCGAAAACAGCAGCGTGAAGAAGGTTGGCGAGGTTATGAGCGGAGATGAGTTGCGAAGGTTTGGGGCTCAGTGGGTGTCTCAATTTGTCGATTGGAACCGGTGGGAACGCTGGAAGAATATCAAGGACTGGGAACCTATGCGAATTGGCACATTTGTTCTTTACATGTTTGTTGTCACAGTTGCTTGTAGAGGAGTATATGTAGCTGTTCAAACACCTTTCCTAAATCGCCAGAAAAAAGAATTAACAGAAGCTTACATGGAAGTGTTAATTCCTGAACCATCCCCTACTAACATCCGAAGATTTAAGAAAGGTATGTGGCAGAGGACAATGCCAAAAGGCCTAAAAATGAAAAAGCTGATTGAAAGACCTGATGGAACACTTGTTCATGATACTTCTTATGTTGGAGAGGATGCATGGGAGAATGATGAAGAGGAGCGTGTAAAACAAATTATAGAGGATGATGAAAGGTTAAGCAAAGAAGAGAAGAAAGAACTAACAAAGGGATTGGGCATTTCAGGTGGAGTTCAATCTGAGGGCACATGGCGTGAAAGACTTCATAAATGGAGAGACATCCTTAGAAAAGAACGTTTTGCCGAGCAATTAGATTCTGTAAATGCCAAATATGTAGTTGAATTTGACATGAAAGAGGTTGAAAATAGTCTTCGGAAGGATGTAGCAGAAAAGGTGACACCCACTCAGGATACTAGGGCTCTATGGATAGCCAAGAGGTGGTGGCGCTATCGGCCTAAACTTCCTTACACTTATTTCCTCAGCAAACTTGATAGTTCTGAGGTAGCAGCTGTTGTCTTCACTGAAGATTTGAAAAAATTGTATGTGACAATGAAAGAAGGTTTTCCATTGGAATTTGTCGTTGATATCCCTCTCGATCCTCATCTGTTTGAGATTATTACAAGTTCTGGAGCTGAAGTAGATCTCCTTCAGAAGCGACAGATCCATTATTTCATGAAGGTTGTGTTTGCATTAGTACCTGGAATACTGATTCTCTGGCTTATAAGGGAGTCTGTGATGCTTCTACACATCACTTGCAAGAAGTTTCTTTACAAGAAGTATAATCAACTCATTGATATGGCTCGAGCAGAAAATTTCATTATGCCAGTTGGAGAAGTTGGTGAAACAAAGTCAATGTACAAGGAAGTTGTGTTGGGGGGTGACGTTTGGGATCTTCTTGATGAGTTAATGATCTATATGGGAAATCCTATGCAGTTTTACGAAAGGGATGTGCAGTTTGTTCGGGGTGTTCTACTTTCTGGACCTCCAGGAACAGGAAAAACATTGTTTGCCAGGACTCTTGCAAAAGAAAGTGGATTACCTTTTGTATTTGCTTCAGGTGCTGAGTTCACCGATAGTGAAAGAAGTGGTGCATCTAGGATAAATGAGATGTTTTCCATTGCTAGGAGAAATGCACCTTGTTTTGTATTTGTAGATGAAATAGATGCTATTGCTGGAAGACATGCTAGGAAGGATCCTCGAAGAAGGGCAACTTTTGAGGCTCTTATTGCACAGCTTGATGGGGAGAAGGAAAAAACTGGTGTTGACCGTGTATCTCTCAGACAAGCTATCATATTCATCTGTGCTACAAATAGGCCAGATGAATTAGATCTTGAGTTTGTTCGACCTGGACGTATTGATCGTCGTCTGTACATTGGTTTGCCTGATGCAAAGCAGAGAATCCAAATTTTTGGTGTGCACAGTTCTGGAAAGCAACTGGCAGAGGATGTGAATTTTGAAGAGCTTGTCTTCCGTACTGTTGGTTTCTCTGGAGCAGATATAAGAAACCTTGTTAACGAAGCAGCAATAATGTCGGTGAGGAAAGGGCATTCAAAAATTTTCCAGCGAGATATTATTGATGTATTGGATAAACAACTGCTTGAGGGTATGGGTGTTCTTCTGACAGAGGAAGAGCAACAAAAATGTGAACAAAGGGTATCTTTGGAAAAGAAGAGATTGCTTGCTGTTCATGAAGCTGGACATGTGGTGCTAGCTCACTTATTTCCTAGGTTTGATTGGCATGCATTTTCACAGCTCCTGCCTGGGGGCAAGGAAACTGCAATATCTGTATTCTATCCTCGAGAAGATATGGTAGACCAAGGTTATACAACATTTGGTTACATGATGATGCAAATGGTAGTGGCTCATGGTGGTCGATGTGCTGAACGTATTGTATTTGGTGATGATATAACTGATGGAGGAAGTGATGATCTTGAAAAGATAACAAAGATCGCTAGGGAGATGGTTATCAGCCCTCAAAATAAAAAGTTGGGGTTAATCGGTTTAACAAAAAGGGTTGGTTTAATTGATCGACCAGACAGCCCAGATGGAGAGTTGATAAGATATAGATGGGATGACCCTCATGTAATTCCTGCTGATATGACCCTAGAGGTGTCCGAGCTTTTTTCAAGGGAGTTGTCAAGGTACATTGAAGAAACTGAAGAACTTGCAATGAACGCTTTACGGAATAATAGGCACATCCTGGACTTGATTACAAAGGAACTACTGGAGAGGTCAAGGGTAACTGGATTGGAGGTTGAAGAAAAATTGAAGGAACATTCTCCTGTAATGTTTGAGGACTTTGTGAAGCCATTCCAAATAAACCCAGACGAGGAGGGACCATTACCGCATAATGATCGACTACGGTATCACTTACCCGACTTATATCCTGCTCCTCTCCATAGATGTTGA 2928 0.4255 MELSVNPLHIFSSQPLSLNPNVFTLTPPPPRRKLRFRVSATAEPDGASWSHSLRRGSRRFWLKFGEMVKKETGLDFENSSVKKVGEVMSGDELRRFGAQWVSQFVDWNRWERWKNIKDWEPMRIGTFVLYMFVVTVACRGVYVAVQTPFLNRQKKELTEAYMEVLIPEPSPTNIRRFKKGMWQRTMPKGLKMKKLIERPDGTLVHDTSYVGEDAWENDEEERVKQIIEDDERLSKEEKKELTKGLGISGGVQSEGTWRERLHKWRDILRKERFAEQLDSVNAKYVVEFDMKEVENSLRKDVAEKVTPTQDTRALWIAKRWWRYRPKLPYTYFLSKLDSSEVAAVVFTEDLKKLYVTMKEGFPLEFVVDIPLDPHLFEIITSSGAEVDLLQKRQIHYFMKVVFALVPGILILWLIRESVMLLHITCKKFLYKKYNQLIDMARAENFIMPVGEVGETKSMYKEVVLGGDVWDLLDELMIYMGNPMQFYERDVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDSERSGASRINEMFSIARRNAPCFVFVDEIDAIAGRHARKDPRRRATFEALIAQLDGEKEKTGVDRVSLRQAIIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRIQIFGVHSSGKQLAEDVNFEELVFRTVGFSGADIRNLVNEAAIMSVRKGHSKIFQRDIIDVLDKQLLEGMGVLLTEEEQQKCEQRVSLEKKRLLAVHEAGHVVLAHLFPRFDWHAFSQLLPGGKETAISVFYPREDMVDQGYTTFGYMMMQMVVAHGGRCAERIVFGDDITDGGSDDLEKITKIAREMVISPQNKKLGLIGLTKRVGLIDRPDSPDGELIRYRWDDPHVIPADMTLEVSELFSRELSRYIEETEELAMNALRNNRHILDLITKELLERSRVTGLEVEEKLKEHSPVMFEDFVKPFQINPDEEGPLPHNDRLRYHLPDLYPAPLHRC* 976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1843 975 Pfam AAA+ lid domain 655 696 IPR041569 -
Pvu11g1843 975 Pfam ATPase family associated with various cellular activities (AAA) 496 632 IPR003959 GO:0005524|GO:0016887
Pvu11g1843 975 SUPERFAMILY FtsH protease domain-like 728 939 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Pvu11g1843 975 Gene3D - 452 634 IPR027417 -
Pvu11g1843 975 PANTHER ATP-DEPENDENT PROTEASE 32 975 - -
Pvu11g1843 975 Gene3D Peptidase M41 718 934 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Pvu11g1843 975 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 458 703 IPR027417 -
Pvu11g1843 975 PANTHER ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 12, CHLOROPLASTIC 32 975 - -
Pvu11g1843 975 SMART AAA_5 492 635 IPR003593 -
Pvu11g1843 975 Pfam Peptidase family M41 725 926 IPR000642 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Pvu11g1843 975 CDD AAA 494 633 - -
Pvu11g1843 975 Gene3D - 635 709 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1843 Pvu-Chr11 45252346 45271824 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1843 11 45252346 45271824 Pvu11g1843 11 45252346 45271824 ECH