Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1837 ATGTTTCTTGAAAGCACCACACAAATGTCTTCCATTTTGGTGCTTCTTCTTCTTGGATTATTATCTTCCATTGCAGGTGCAGAAGCCATAGGGGTTTGCTATGGAGTACTCGGTAATAATCTACCATCAAAGCAAGAAGTTGTTGATTTATACAAAAGCAATGGCATAGGTAAAATGCGTATATATTTTCCAGAAGCAGAAACACTTGATGCTCTCAGAGGTTCAGGAATAGAGTTGATCATGGACGTGGCTAGGGAATCTCTTCAAGCTATGACAGACCAAAATGCTGCCACAGATTGGGTGAGAACAAACGTGGTACCCTATGCACAAGACGTGAATTTCAAGTACATTTCTGTAGGAAATGAAGTTCGTCCAAATCAGAATGAGGCTCAGTACATTTTGTCTGCAATGAGAAACATTCAGAATGCAATTTCATCAGCAAATCTGCAGGGTCAAATCAAGGTGTCTACAGCAATAGACTCCACTCTTATTTCTAACTCTTACCCACCTAATGATGGAGTTTTCAATTCAGAGTCATATGTGAGACCCATTATCGAGTTTCTGAAGAGCAATGGATCCCCACTTCTTGCCAATGTGTATCCCTACTTTGCTTATATTTATGATAAACAAAACATTCCTCTTGACTATGCTCTTTTCACCCAACAAGGGCAGAACAGTGTTGGGTACCAGAACCTGTTTGATGCAATGTTGGATTCAACATATGCTGCTCTTGAGAAAATGGGGGCATCTGATGTGAAGATAGTTGTTTCTGAGAGTGGGTGGCCATCTGCAGGTGGTGATGCAGCTTCAACTCAGAATGCAGCCACTTACTATGCCAATTTGATTAGTCATGCAAAGGGTGGAAATGGAACTCCAAAGAGACCAGGTGGATCTATAGAGACTTACTTATTTGCAATGTTTGATGAAAACAATAAGAATGGTGAGGAATCTGAACGTCATTTTGGTCTCTTCACTCCTGATAAATCACCCAAATACCAACTTAGTTTCAATTAG 1014 0.4034 MFLESTTQMSSILVLLLLGLLSSIAGAEAIGVCYGVLGNNLPSKQEVVDLYKSNGIGKMRIYFPEAETLDALRGSGIELIMDVARESLQAMTDQNAATDWVRTNVVPYAQDVNFKYISVGNEVRPNQNEAQYILSAMRNIQNAISSANLQGQIKVSTAIDSTLISNSYPPNDGVFNSESYVRPIIEFLKSNGSPLLANVYPYFAYIYDKQNIPLDYALFTQQGQNSVGYQNLFDAMLDSTYAALEKMGASDVKIVVSESGWPSAGGDAASTQNAATYYANLISHAKGGNGTPKRPGGSIETYLFAMFDENNKNGEESERHFGLFTPDKSPKYQLSFN* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1837 337 ProSitePatterns Glycosyl hydrolases family 17 signature. 252 265 IPR000490 GO:0004553|GO:0005975
Pvu11g1837 337 Pfam Glycosyl hydrolases family 17 30 336 IPR000490 GO:0004553|GO:0005975
Pvu11g1837 337 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 23 334 - -
Pvu11g1837 337 Gene3D Glycosidases 28 337 - -
Pvu11g1837 337 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 23 334 IPR044965 GO:0004553|GO:0005975
Pvu11g1837 337 SUPERFAMILY (Trans)glycosidases 30 336 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1837 Pvu-Chr11 45211742 45213138 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1837 36 336 Glycoside Hydrolase AT4G16260 50.489 7.02e-105 308
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1837 11 45211742 45213138 Pvu11g1837 11 45211742 45213138 ECH