Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1836 ATGGAAGACATAAACAGGTGGCTATTATCGTCTTATTTGAATGAAAGTGTTAACCATGATTTTGCCATCAGAAGGTATTGTCCAGCAAGAATGGAGCAAGAGCAAGGAGGAGAGTGCCAAGATCAAGAGGGAGTGGTTTTTGATGATACTGAGTTATGTTCTTCTGATGACAGCACTCCTTGTTTGGCTTCATCAGAAGTTGATGACTTTGTTGATAGCTTCATCAACATGGATCAGTATGAGAAAGCAGATCAAGGGTACCAAGAGAAGCATAAAAGTTTTGGCCACTTTGTGGTGAGTAATGATGATGATGAGGCTGATGAATACTCCTCCATGAATGGTGTCTTTGGATATCTTCCAACCACCATGGAGGATTCAGAATTGGAGATCTATGAAAATCTCACAACATCCATGTTGGAGGAAGAGGTTGTTGCAATGAGTGACTCTTTGGGTGCAATACCTGAGTTTGTGCATTGTGCCAAAGAGGCCAACCTTGGTGTGGACCAAGGCTTAGAGTTGGTTCACATGCTGCTGGCCTGTGCTGAAGCTGTGGGGTGTAGGGACAACCAGCAAGCTGAGTTGCTGATCAGAAGAATTTGGACTTTGGCAAGCCCTTCAGGAGATGCACTGCAAAGAGTTTCCTACTGTTTTGCCACAGGATTGAAGTGTAGATTGTCACTTCTTCCATATAATGTCATTACAAATGGTACACTCACAGATACTTCCATGGATATGCCTTTGATCAATAGGGAGAATAAGATGGAAGCATTTCAACTTCTTTACCAAACCACACCTTACATTGCCTTTGGTTTCATGGCTGCAAATGAAGCCATATGCCAAGCATCACAAGGAAAGAGCTCAATACACATTGTTGATTTAGGAATGGAGCATACCCTTCAGTGGTCTTCCCTCATAAGGGCCTTTGCTTCAAGGCATGAGGGTCCTCCAATGCTCCGGATCACAGGATTAACCGACCATGAAGATAACTCTAAACTTCAAACTAGCATGAGTGTGCTTGTGGAGGAAGCAAGCTCTTTGGGAATGCATCTTGAATTCCAGACAATTTCTGAGCCTGCATCTCCTTCTCTTCTTACTGTGGAGAAGCTGAACTTGAGAAAAGGTGAAGCTTTATTTGTCAATAGTATCTTGCAGTTGCACAAATATGTCAAAGAAAGTAGAAGCTATCTGAAGGAAATTCTGCTATCAGTGAAGAAGCTAGGTCCAACTGCTTTTACAGTGGTAGAGCAAGACACAAACCACAATGGCCCTTTCTTCCTTGGGAGATTTTTGGAATCACTTCACTATTACTCGGCCATATTTGATTCTCTTGAGGCATGTATGCCAAGAAATAGCCAACAGAGGATGAAGATAGAGAGATTACACTTTGCAGATGAAATTCAGAACATTGTAGCTTATGAGGGTCCAGAAAGAACAGAAAGACATGAAAGGGTAGACCAATGGAGAAGGCAATTAGGCCGAGCAGGATTTCAGGTGATACCATTGGAGTGCACAAGCCAAGTTAGAATGATGCTTTCTGTTTATGAGTGTGATGGATACACATTATCCTGTGAGAAGGGAAACCTTCTACTTGGATGGAAAGGAAGGCCAGTGATGATGTCTTCTGCATGGAAAGTGGCAAGTATGTGA 1647 0.4262 MEDINRWLLSSYLNESVNHDFAIRRYCPARMEQEQGGECQDQEGVVFDDTELCSSDDSTPCLASSEVDDFVDSFINMDQYEKADQGYQEKHKSFGHFVVSNDDDEADEYSSMNGVFGYLPTTMEDSELEIYENLTTSMLEEEVVAMSDSLGAIPEFVHCAKEANLGVDQGLELVHMLLACAEAVGCRDNQQAELLIRRIWTLASPSGDALQRVSYCFATGLKCRLSLLPYNVITNGTLTDTSMDMPLINRENKMEAFQLLYQTTPYIAFGFMAANEAICQASQGKSSIHIVDLGMEHTLQWSSLIRAFASRHEGPPMLRITGLTDHEDNSKLQTSMSVLVEEASSLGMHLEFQTISEPASPSLLTVEKLNLRKGEALFVNSILQLHKYVKESRSYLKEILLSVKKLGPTAFTVVEQDTNHNGPFFLGRFLESLHYYSAIFDSLEACMPRNSQQRMKIERLHFADEIQNIVAYEGPERTERHERVDQWRRQLGRAGFQVIPLECTSQVRMMLSVYECDGYTLSCEKGNLLLGWKGRPVMMSSAWKVASM* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1836 548 ProSiteProfiles GRAS family profile. 164 544 IPR005202 -
Pvu11g1836 548 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 3 546 IPR005202 -
Pvu11g1836 548 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 3 546 - -
Pvu11g1836 548 Pfam GRAS domain family 173 544 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1836 Pvu-Chr11 45194811 45196457 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1836 168 545 GRAS Transcription Factor Family AT1G66350 37.887 3.99e-75 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pvu11g1836 GRAS 2.3e-107 CL0063