Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1835 ATGATGGAACAGCCTAGATTCTACAAACACCTTCAATGCAATACCATGGAACCTAGAAATGAGGAGTTCCAGCCTGGATCTCAATCAATAATTCAGGACCATGTGGATGGCATGCATTCTATTAGACGACCATCTGACTATAGCACATCAGATGTTAAACCCGTACTTAATTATTCAATACAGACGGGTGAGGAATTTGCTTTTGAATTCATGCGAGATAGGGTGAATCTCAGGAAGCCCATGTTTTCAAATGTTAGTGATTCCTCTTCCAATTATGCAACTGGTAGCATGGAACTGAAAGGCATCAGCCATGCAGCTTCTGAAAGTGGATCAGACATTTCTATGCTATCCAAAGCTGAGAAAGGTCCAACAGAGTTTAACAGACAGGGTACATCATCACACGGAGACAGAAGCAATTATGGGTCAATTCGATCGATACCAAGAGTTTCATTGAATCAGGAGAATAGTCGATTTGTTTGTGGTTATGGCTCTTCTGTTGGTTCTGACAGCTCATCAATGATGAAGTGTCTTTGTAGCTTTGGTGGCAGAATATTGCCACGACCAAGTGATGGGAAGCTAAGGTATGTTGGAGGTCAAACTCGTATTCTTCGTCTAAGAAAGGACATATCTTGGCAGGAGCTTATGCAAAAAGCATTGTTAATCTATAATCTGGTTCATGTACTAAAATATCAACTTCCCGGGGAAGATCTTGATGCATTGGTATCAGTATCATCTGATGAGGATTTGCAGAATATGATGGAGGAATGTAATCTTCTAGAAGATAGAGAGCGCTCAAAAAAGCTTAGGCTGTTTTTGTTCTCAATGAGTGATTTGGAAGATGCTCAATTTTCTCTCAGCAGCATTAGTGATGACTCTGAGGTCCAATATGTTGTTGCTGTTAATGGCATGGACTTTGGATCAATAAACAGCTCAACCCCACTTGGTGTCAGTTTTTCAGCAGATGATCTGCATGAATTGGAAAGGCAAACCTCACATAGAGAGACTAACAGAGCTGCTGTAGAATCTATCAGGGCCAGCGATGCTCCCTTGACTAACAAATCTGATCCTTCGTTGACTATTCATTCTTCACAAGCAGTTCTACCAAATGCCTCAAATTCTTATGAAGTTGATCAACTATCTTATGGTGACCAAATGGCTCAATTTGGGGAATATAGTCATCAATATTTTGTTCACCATGGCCTTAATTCCACTCATAGCCCTGTTGGAGAGACTCCTATTCCTGTGGCTCCTTCTCTACCTAACAATCAACAAGGGGTTCAGAATGAAGACCATCTATCTATTGGATCACAAATTCAAAATTCTCAGTTATCTGCAATGCATGTGAAAAAGATAAGTGATAATTTAATTAAGCGAGAAAGTGACTCTGAAAAAGTTTTATCCTCAGAAACCACATCTCCAGCTCCCTTACAAACCTATGATAGTGGCTTAAAAAGTAATTTTCCTGAAGCATCGGTAGTAGTTACCATGCCTGAGGGACATCTACCTTCATTGCCTTCAACAAAAAAGGTGCAGCACAAGGATTATGATGAGTTCTCTTCTACTTCTAGCAGTGCATTTGTTCCTGCTTATGTTGATTCCCATGCCAATGCAATTGATTTGAGTTGTCTTCATCCTCCACCACTTCCTGAAAGAGTTTATTATTCAGAAAGAACTCCAAGGGAGCAAGTCGAGTTGCTGAATCGTTCCTCAAAGTCAGATGACACACATAGTTCTCAAATTCATGTCTCAGATTTACTTTCTGATGTCAACCCAGAGGACCCAGTAACAGAATCTGGGGACAACTTGCATCCAACTGATGAGTTGGGTAATGCAGAAAAGCCCTTGAATGCAGATGGCCATACCACTGACAATGGGTTTTCCAAAAATCAAATGAGCAAACCGTTGCCTGATACAAACAGTCTGATTAAGTCAAAACTATCTGAGCACTCAGACTCTGAGTTGAAGCCAGTGTTGTCAAGCAATGAAGGAACTAAAGATGTTGAAACTGATAATTATCATAAAGGTAGCCAAACCAAGCCTTTGCTTGACGAAACTGAAACCAAGACCAAAACCAAAGATGGTAAATCAGATCTTACTGCTTTGCATCATGTTTCCTCTGCTAAGCGTCTTGATGATCTAGCATCCAATCTGCCAGAGATTGATTGGGGTGAAGCCTCAGGGAAGGAATCTAGTGATGGTCGTATGGTACAAGAACTACCTGTATCTGTGACTGGGAACATAACCAAAGATGTTTATCAAGATTTCCCCCAAAGTGTTGTTTCCAAACAATCTCAAGGGGACATTCTTATTGACATTGATGATCGATTCCCCCGAGAATTGCTTTCAGTGTTTTCTAAAGCAATACATGGAGAAGATCCCTCCAGTCTGCACCCACTGTCCGGAGATGGAGTAGGCTTAAGCATAAATATGGAAAATCATGAGCCCAAAAGATGGTCATATTTTCACAAATTAGCGCAAGGGCTTGATAATGTCTCTCTTATTGATCAAGATCATCTTGGTTTTTCACCCGGGATAGGAAAAGCAGAAGATAATAGAACTCATCATGTTATGCCGCTAACAACTGATGGAGATCCCCTACATCATGAAGATTCCCATCTCAATTTTAATGAAGAAAATCCCCAGGACTTACATACAAGGATGGAAACTGAAACTACCATTCTGAAGTCTAATTATAATCAATCCCAACTTAAGGATAATGAGAGTATGCAGTTTGATGCTATGATGGAAAATTTAAGAATGCAAGGGTCAGAGTTTGAGGACAAATTTGATGTGAAAAATAACAACCTACCTCCACCCCTTGATCCTTCTTTCGGAGAGATTGACATTAGTACTGTGCAGGTCATTAAGAATGAAGATCTTGAAGAGCTGCGAGAACTAGGTTCTGGTACCTTTGGGACCGTGTATCATGGAAAATGGAGAGGAACAGATGTTGCTATTAAAAGAATAAAGAAGAGCTGCTTCACGGGTCGGTCATCTGAACAAGAGAGATTGACTGTAGAGTTTTGGCGGGAAGCTGACATTCTTTCCAAGCTTCATCATCCAAATGTGGTTGCATTTTATGGTGTGGTACAGCACGGACCAGGTGGTACAATGGCCACTGTGGCAGAATATATGGTGGATGGTTCTCTTAGGCATGTATTACTTCGCAAGGATAGGTATCTTGATCGTCGCAAGAGGCTGATAATTGCAATGGATGCAGCTTTTGGAATGGAATATTTGCACTCAAAAAACATTGTGCATTTTGACTTAAAATGTGACAATTTGCTTGTAAACTTGAAAGATCCTTTACGTCCAATATGCAAGGTTGGTGATTTTGGCTTATCAAAAATTAAGCGAAATACTTTGGTTACTGGTGGTGTGCGTGGGACATTACCTTGGATGGCACCAGAGCTTCTGAATGGCAGCAGCAATAAGGTCTCAGAAAAGGTTGATGTGTTCTCCTTTGGCATAGTATTGTGGGAAATTCTTACTGGTGAGGAGCCATATGCCAATATGCACTATGGTGCAATTATAGGTGGGATTGTAAATAACACATTAAGGCCAACCATCCCAAGTAACTGTGATCCTGAATGGAGAACACTAATGGAACAGTGTTGGGCTCCCAATCCTGCAGTCAGACCATCTTTCACAGAAATCGCCAGTCGTTTGCGCATAATGTCTGCAGCAGCAAGCCAAACCAAAACACAGGGCCATAAAACTTCTAAATGA 3729 0.4087 MMEQPRFYKHLQCNTMEPRNEEFQPGSQSIIQDHVDGMHSIRRPSDYSTSDVKPVLNYSIQTGEEFAFEFMRDRVNLRKPMFSNVSDSSSNYATGSMELKGISHAASESGSDISMLSKAEKGPTEFNRQGTSSHGDRSNYGSIRSIPRVSLNQENSRFVCGYGSSVGSDSSSMMKCLCSFGGRILPRPSDGKLRYVGGQTRILRLRKDISWQELMQKALLIYNLVHVLKYQLPGEDLDALVSVSSDEDLQNMMEECNLLEDRERSKKLRLFLFSMSDLEDAQFSLSSISDDSEVQYVVAVNGMDFGSINSSTPLGVSFSADDLHELERQTSHRETNRAAVESIRASDAPLTNKSDPSLTIHSSQAVLPNASNSYEVDQLSYGDQMAQFGEYSHQYFVHHGLNSTHSPVGETPIPVAPSLPNNQQGVQNEDHLSIGSQIQNSQLSAMHVKKISDNLIKRESDSEKVLSSETTSPAPLQTYDSGLKSNFPEASVVVTMPEGHLPSLPSTKKVQHKDYDEFSSTSSSAFVPAYVDSHANAIDLSCLHPPPLPERVYYSERTPREQVELLNRSSKSDDTHSSQIHVSDLLSDVNPEDPVTESGDNLHPTDELGNAEKPLNADGHTTDNGFSKNQMSKPLPDTNSLIKSKLSEHSDSELKPVLSSNEGTKDVETDNYHKGSQTKPLLDETETKTKTKDGKSDLTALHHVSSAKRLDDLASNLPEIDWGEASGKESSDGRMVQELPVSVTGNITKDVYQDFPQSVVSKQSQGDILIDIDDRFPRELLSVFSKAIHGEDPSSLHPLSGDGVGLSINMENHEPKRWSYFHKLAQGLDNVSLIDQDHLGFSPGIGKAEDNRTHHVMPLTTDGDPLHHEDSHLNFNEENPQDLHTRMETETTILKSNYNQSQLKDNESMQFDAMMENLRMQGSEFEDKFDVKNNNLPPPLDPSFGEIDISTVQVIKNEDLEELRELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTVEFWREADILSKLHHPNVVAFYGVVQHGPGGTMATVAEYMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPSNCDPEWRTLMEQCWAPNPAVRPSFTEIASRLRIMSAAASQTKTQGHKTSK* 1243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1835 1242 MobiDBLite consensus disorder prediction 564 578 - -
Pvu11g1835 1242 MobiDBLite consensus disorder prediction 119 140 - -
Pvu11g1835 1242 MobiDBLite consensus disorder prediction 466 482 - -
Pvu11g1835 1242 SMART PB1_new 188 275 IPR000270 GO:0005515
Pvu11g1835 1242 MobiDBLite consensus disorder prediction 666 695 - -
Pvu11g1835 1242 MobiDBLite consensus disorder prediction 124 140 - -
Pvu11g1835 1242 Pfam Protein tyrosine and serine/threonine kinase 961 1223 IPR001245 GO:0004672|GO:0006468
Pvu11g1835 1242 SUPERFAMILY Protein kinase-like (PK-like) 948 1223 IPR011009 -
Pvu11g1835 1242 PANTHER SERINE-THREONINE PROTEIN KINASE 94 1242 - -
Pvu11g1835 1242 SMART serkin_6 960 1226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1835 1242 PANTHER - 94 1242 - -
Pvu11g1835 1242 Pfam PB1 domain 190 273 IPR000270 GO:0005515
Pvu11g1835 1242 ProSiteProfiles Protein kinase domain profile. 960 1225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1835 1242 MobiDBLite consensus disorder prediction 620 643 - -
Pvu11g1835 1242 MobiDBLite consensus disorder prediction 459 482 - -
Pvu11g1835 1242 CDD PB1_UP2 177 273 - -
Pvu11g1835 1242 PRINTS Tyrosine kinase catalytic domain signature 1042 1055 IPR001245 GO:0004672|GO:0006468
Pvu11g1835 1242 PRINTS Tyrosine kinase catalytic domain signature 1079 1097 IPR001245 GO:0004672|GO:0006468
Pvu11g1835 1242 PRINTS Tyrosine kinase catalytic domain signature 1150 1172 IPR001245 GO:0004672|GO:0006468
Pvu11g1835 1242 PRINTS Tyrosine kinase catalytic domain signature 1194 1216 IPR001245 GO:0004672|GO:0006468
Pvu11g1835 1242 Gene3D - 192 275 - -
Pvu11g1835 1242 Gene3D Transferase(Phosphotransferase) domain 1 1048 1242 - -
Pvu11g1835 1242 ProSitePatterns Protein kinases ATP-binding region signature. 966 991 IPR017441 GO:0005524
Pvu11g1835 1242 SUPERFAMILY CAD & PB1 domains 189 278 - -
Pvu11g1835 1242 Gene3D Phosphorylase Kinase; domain 1 953 1047 - -
Pvu11g1835 1242 CDD STKc_MAP3K-like 966 1223 - -
Pvu11g1835 1242 MobiDBLite consensus disorder prediction 564 695 - -
Pvu11g1835 1242 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1085 1097 IPR008271 GO:0004672|GO:0006468
Pvu11g1835 1242 MobiDBLite consensus disorder prediction 329 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1835 Pvu-Chr11 45178234 45191719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1835 50 603 MAP Kinase Kinase Kinase AT1G16270 37.258 5.42e-86 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Pvu11g1835 PK_Tyr_Ser-Thr 3.2e-62 CL0016