Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1834 ATGGCTTGCAGTGCAGAAAGAAAACCTCATGTGTTGCCACTTCTGACGTGGTTCTTGTTGTGGTGGTGGAGTACTTGTGTCCATGGTGAAGCCACCAACAATACTTTGAGGCCAGGTGATACGTTGAAGGCCAGAGGAGAGGCCAAACTATATTCAGAAAAGGGTAACTACTGCATGTACTTTAACCCAATATCTGATGGTGAGAGTGAAGCTATCTTATATATATATGATCAGAAGGATCTTTGGGCTGTGTGGATTGCTAATAGAGACCAACCTGTTGACATAAATTCTGCAGTTCTATCATTGAATCATTCTGGGGTACTCAAAATAGAATCTCAACATGGAGAAATCATCCTTTTTTCACCACCTCAAGCTATCAACAACACTGTGGCTACACTGTTGGACACAGGTAGCTTTGTGCTTCAAGAACTTCACCCCAATGGGTCTGCAATTGGTGTGTTGTGGGAAACTTTTGATTTCCCCGCAGACACTTTGCTCCCAGGGATGAAGTTAGGTGTGAATCACAAAACTGGTCATAAATGGTCACTGGTTTCATTGCTGAGTAAATATGTTCCTACTCCTGGTCCCTTCAGGCTTGAATGGGAGCACGAAACAAGACAGTTGAAGATCAAGAGAGGAGAAAAGCTTTACTGGGCTGCTGGTGAAAAAGAGATGAAGCACATCTTGGGGGAGGCTTATCACCAAATAGTGTTTGTCTCAAATGAAAATGAAGCCTACATCACATTGAGGAGTTCAGAGGAAGAGCTCACAAAATGGACACTGTTGTCCACTGGTCAAGTGATAAACAGGAATGGAGGTGATGTTGCAAGGGCTGATCAGTGTTATGGATACAAAACAGATGAAGGGTGCCAAAAGTGGGAGGATCTACCCTCTTGCAGAAATTCTGGTGATGCCTTTGAACTGAAGCAAGGTTATGCCAATTTTGACTTGCGCATGACAAGAGATGAAGCAAATTCAAGTTATGGCATAAATGATTGCCAAGCTATTTGCTGGAGAGACTGCAACTGTGTTGGATTCACTCATCTTTATAATAATGAAACTGGTTGTACCTTCTTTCTGTGGAATACAACCAAGGGTACCAACATTGCAAGCGAGGGTGATAAGTTTTACATGCTGGTAAAGAGCAACCATCACAAAAGTACAGAAAAATGGATATGGGCAATTGTTGCAATAGGAGCAACTATACTCATAATCTGCCTTAGCCTTCTGTGTCATAGAGCCTTAAGGAAAAGAAAATATGCCCTTGAAGAGCTTAAAGCTAAAAGAATGGGGATTGAGAATGAGGATCTTGAAGCTTCCAATAGATCTTCTTATGCAGAAAAACTAGAAGTTTTTTTAAAGGATGAACATGACAAGGTTTTTAAGTATGCATCAATAGTGGAAGCCACAAATGACTTTTCATCTGAAAACAAGTTAGGACAAGGAGGCTTTGGACCAGTTTATAAGGGAATTCTACCTACAATGCAAGAAGTTGCTGTGAAAAAACTTTCAAAATCTTCCAGGCAAGGTCTACTTGAATTTAAAAATGAATTAACAGTCATATCTAAACTGCAGCACACAAATTTGGTTCAGCTACTCGGTTACTGCATTCACGAAGACGAGAGGATTTTGGTTTATGAGTATATGCCTAACAAAAGCTTGGACTTCATTTTATTTGATTGTACACAAAATCAGTTGCTAGATTGGAATAAGCGTTTCAGTATAATAGAAGGAATTGCTCAAGGATTACTATACCTTCACAAATACTCAAGACATAGAATCATTCACAGAGACTTGAAGGCTAGCAACATACTCCTTGATGCCAATATGAACCCCAAAATTTCTGATTTTGGCATAGCAAAAATGTTCACACAGCAGGATTCTGAATCAAATACCACCAGGATTGTTGGCACTTATGGTTACATGTCTCCTGAATATGCTATGGAAGGAGTTTTCTCAACAAAATCTGATGTGTATAGCTTTGGAGTGTTGCTCTTTGAAATTGTTAGTGGTAAAAGAAACAATAGCTTCTACACTGATGAAAGACAACTGAATCTAGTAGGACATACATGGGAGCTATGGAAAGAAGGTGAGGTTCTTAAGTTGGTGGATCCATCACTGAATGATTCATTTTCAGAGGATGAAGTGCTAAGATGTGTGCATGCTGGTCTTTTATGTGTGGAAGAAAATGCAGATGATCGCCCCTCCATCTCTAACATTGTATCTATGTTAGCCAACAAAAGTAAAGTTACTACTGTGCCTAAAAAACCAGCTTATTATGTTAGAACAAAAGTCCTTGGGGAAGAAACATCCACCAGAGATTTTGGTTTAGATTCTACACACGAGAATTCCCTTTATGTATCTTCAACTTGA 2373 0.397 MACSAERKPHVLPLLTWFLLWWWSTCVHGEATNNTLRPGDTLKARGEAKLYSEKGNYCMYFNPISDGESEAILYIYDQKDLWAVWIANRDQPVDINSAVLSLNHSGVLKIESQHGEIILFSPPQAINNTVATLLDTGSFVLQELHPNGSAIGVLWETFDFPADTLLPGMKLGVNHKTGHKWSLVSLLSKYVPTPGPFRLEWEHETRQLKIKRGEKLYWAAGEKEMKHILGEAYHQIVFVSNENEAYITLRSSEEELTKWTLLSTGQVINRNGGDVARADQCYGYKTDEGCQKWEDLPSCRNSGDAFELKQGYANFDLRMTRDEANSSYGINDCQAICWRDCNCVGFTHLYNNETGCTFFLWNTTKGTNIASEGDKFYMLVKSNHHKSTEKWIWAIVAIGATILIICLSLLCHRALRKRKYALEELKAKRMGIENEDLEASNRSSYAEKLEVFLKDEHDKVFKYASIVEATNDFSSENKLGQGGFGPVYKGILPTMQEVAVKKLSKSSRQGLLEFKNELTVISKLQHTNLVQLLGYCIHEDERILVYEYMPNKSLDFILFDCTQNQLLDWNKRFSIIEGIAQGLLYLHKYSRHRIIHRDLKASNILLDANMNPKISDFGIAKMFTQQDSESNTTRIVGTYGYMSPEYAMEGVFSTKSDVYSFGVLLFEIVSGKRNNSFYTDERQLNLVGHTWELWKEGEVLKLVDPSLNDSFSEDEVLRCVHAGLLCVEENADDRPSISNIVSMLANKSKVTTVPKKPAYYVRTKVLGEETSTRDFGLDSTHENSLYVSST* 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1834 790 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 12 788 - -
Pvu11g1834 790 Gene3D Phosphorylase Kinase; domain 1 434 548 - -
Pvu11g1834 790 SUPERFAMILY Protein kinase-like (PK-like) 459 761 IPR011009 -
Pvu11g1834 790 PIRSF SRK 271 790 IPR024171 GO:0004674
Pvu11g1834 790 PIRSF SRK 6 275 IPR024171 GO:0004674
Pvu11g1834 790 CDD STKc_IRAK 479 744 - -
Pvu11g1834 790 ProSiteProfiles Bulb-type lectin domain profile. 33 154 IPR001480 -
Pvu11g1834 790 Coils Coil 422 442 - -
Pvu11g1834 790 Pfam D-mannose binding lectin 84 185 IPR001480 -
Pvu11g1834 790 SMART blect_4 33 161 IPR001480 -
Pvu11g1834 790 ProSitePatterns Serine/Threonine protein kinases active-site signature. 594 606 IPR008271 GO:0004672|GO:0006468
Pvu11g1834 790 ProSiteProfiles PAN/Apple domain profile. 299 382 IPR003609 -
Pvu11g1834 790 Pfam Protein tyrosine and serine/threonine kinase 476 744 IPR001245 GO:0004672|GO:0006468
Pvu11g1834 790 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 181 IPR036426 -
Pvu11g1834 790 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 12 788 - -
Pvu11g1834 790 Gene3D - 27 158 IPR036426 -
Pvu11g1834 790 Gene3D Transferase(Phosphotransferase) domain 1 549 760 - -
Pvu11g1834 790 SMART serkin_6 473 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1834 790 ProSiteProfiles Protein kinase domain profile. 473 750 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1834 Pvu-Chr11 45151411 45155628 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1834 461 763 Receptor kinase-like Gene Family AT3G45860 58.689 4.56e-122 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu11g1834 PK_Tyr_Ser-Thr 7.4e-50 CL0016