Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1833 ATGTTCATAGAGGAAATGGAAGACAGAGAGAAGAACACTTGCATTTCTGAGCTAATTGATGGCAATGAGAAGGAAAAGAAGAAGAAGAAGGTGAAGCAAGTCACCCAGAGAGTTGCTGTGAAAGCATCAGCACCAAATCCTGCAACTGCAAACAATGGTGGTAATGTCAGTGCTGTTAGGATTGCTCTGTTCGATTTTTCGGTTGAAAATTTCTTCCGAGACATGGACACCATTGTCAGACTCTGTGGGAAGGAAGAAGACGGTGCTGCTATTGACCAGAGTGAGATTCAGAGAATGTCTTCCTCAGTCACTTTCTTAAGAGAATGGAGAGATTTTAAATATCCATCAAAAAACATTAAATTTGCATACGGAATGGAGAGCTCTAATTGTTTTGAGGGGAAAGATGTCAGTGCCATAAATTTGCCCCCATTTTCTTCTGCTTCTGTTCCTGAGCAAGATATACAAAAGGAACAACTTGGGGAGGTCATATCTCAAGAACGCAGAGATTTTGTGATGAATGTTGGAGGCTCTGTATGGGCATTAGACTGGTGTCCTCAAATACATGAAAAACCTGATTCTTCAGTTAAATGTGAGTTTATTGCTGTCGCTGCTCATCCACCGGGCTCTTCTTATCACAAAATGGGTGCCCCACTTACTGGCAGAGGTGTCATACAAATATGGTGTCTTCTAAATATCTCGGAAAACAATGACAAGTCAACAAAAAAGAAGAAGCCAAAATCTCGAAAAAATCCAACTGTGGTGAATGATATGACTTGTGATAAAACAGATGGAGACACAACTGACAAATCAACCCAAATAAAGAAGCCTAGAGGAAGACCAAGAAAAAATCCAATAGTGGTAGCAGTGGATGATATGAATTGTGCTAAAAAAGATGGAGGTGAAAATGATAAATCGACGCTAATAAAGAGGCCTAGAGGAAGACCTAGAAAGAATCCAACAGTGACAGCAGTGGATGATGAAAATTGTGAGATCCAGGATATGCCTGCTCTTGCTGTTCAATTTCCAGAAAATTCTACCGAGTTTCCTACTCCAGATGGGAATCATGAAAAAAATGAAGAAATACTTCCAAAATGTGATGGAGGCACAAATGACAAATTGACACAAATAAAGAGGCTTAGAGGAAGACCAGGAAAAAATTCCATAGTAATTGCAGTGGATGATATGAACTGTGAGACCCAGAACAAGTCAGCTAGTGATGTTCAATTTGCACAAAGTTCTACTGAGTTTCTTGCTTCAGATGGAAATCTTGAAAACAATGAAAAACTTATTATGTACAAAAGAAAAAACAGAGCTAAAGAAAATGTAGAGACAGATGAAAATTCAGCACTAGTAAAGAGTCTTAGAAGAAGACCAAAATCAAATTCAAAAGGAGTAACAGCAGATGATCCAAATTGTAACAATAAATCTATGCCTCTTGACATTCAAAACGCAGAAGATTTAACTGAATATTTTTCCAAAGATATGACTCTTGACAATTGCAATGAAAAATCAGTACATAGGCCTAGAAGAGGACATGAATCAAATTCAGCAATGACAAATAATTCAAATTGTGAGAATGAACCCATGCCTCTTGATATTCAAGTCCCAGAGGATTCAGCTGATTTTCTTTCTCTAGATGTGGCTCATGACAATTGCAATAAACATTCTTTGCAACAATATTCTGTTACAAAGCAAATACATACAAAGGAGGCTGTTTCTGCCTGCAATACTTTTTCAACAACTGTTGTTAAAAACAGTGGATTGAAAATTAATCATAGAGAAGGGAGATATGACCAAGATATAAGTGAGCCACTACAGTATGATAATGAGGCAAATTATCAACTATGTTCTACCTCTGAGTTGGAAGCTTGTTCTGTTCCGGAAGATGTAACTTTGCCTAGAGTAGTTTCATGCCTAGCTCATAATGGAAAAGTTGCATGGGATGTGAAATGGAGACCTACTAACATTTCTGATTCTTCTTACAAACATCGAATGGGCTATCTTGCTGTCTTGTTGGGCAATGGATCTTTGGAAGTGTGGGAGGTTCCTCTTCCTCATGTATTGAGAACAATTTATATGCACAGAGAGGGGACTGATCCACGTTTTATAAAATTGGAGCCTGTATTTAAATGCTCAATGTTGAAGCGTCGTGGCATACAAAGCATTCCACTGACAGTGGAGTGGTCAGTTACACCCCCACATGACTATTTACTTGCTGGCTGCCATGATGGAACGGTTGCTTTGTGGAAGTTTTGTATAAATTCTTCATCCAAATGTGATGATACAATGCCTGTGCTTTGTTTTGGAGGGGATACAGTTCCTATTAGAACAGTTGCCTGGGCTCCGTTTGAAGGGGATCCAGAGAGTTCTAATATAATAGTAACTGCTGGACATGAAGGCCTTAAGTTTTGGGACCTACGTAATCCATTTCGTCCTTTGAGGAACCTCCATCCTTTGCCAAGAATCATATATAGTTTGGATTGGCTGTCAAAGCCAAGTTGCATCATTATGTCCTTTGAAGATGGAACAATGAAAACCATTAGCTTGGCGAAGGCTGCAAATGACCTTCCTGTCACTGGAGAAATATACAGTGGAAAAAAGCAACCTGGGTTGCACGGTTCTTTATATGCATCGTTTGCCATTTGGAGTGTTCAAGTGTCACGTATAACAGGCATGCTTGCTTATTGTGGTGCAGACGGTACTGTCTTCCGTTTTCAGCTTACTACTAAATCAGTGGAAGCAGATCATGCACGCAATTCAGCCCCACGTTTTCTTTGTGGGTCAGTAACCGAGGAGAATTCAAATCTATTCATCAACACTCCTCTATCAAATGCTCCTGTTCCGTGGAAGAAGCCACCTGTCAAGGGTCGATGTGCTGAGTCTTTCCGAGACCTGTTATCCAAGACAAATCCATACAAAAATGCTCTTAATCAAGTGCCAGAAACTTCAATTTTTGATTGTGATTCTCAGACTTTAGCCATTTGTGGTGGTGAGAATGTGGATTTGTTGGAATCTGGGTCGGAGGAAGCTTCATATTCTATGAAGCAGCCCAAAGGGCCAAAACTGAACAAGGGCAGCAAGAAGAAACAAGATGAAAAGTCGGATTTTGGGAATATACCTGAAACCTTCCCTCCCAAAATGGCTGCGTTGCACAAAGTGAGATGGAACATGAACAAAGGTAGTGAAAGATGGTTATGCTTTGGAGGAGCTTGTGGACTCGTACGTTGTCAGGAGATTGTTTACTCTGATATTGATAACAAATTGGCCTTGAAAAAATGA 3279 0.3977 MFIEEMEDREKNTCISELIDGNEKEKKKKKVKQVTQRVAVKASAPNPATANNGGNVSAVRIALFDFSVENFFRDMDTIVRLCGKEEDGAAIDQSEIQRMSSSVTFLREWRDFKYPSKNIKFAYGMESSNCFEGKDVSAINLPPFSSASVPEQDIQKEQLGEVISQERRDFVMNVGGSVWALDWCPQIHEKPDSSVKCEFIAVAAHPPGSSYHKMGAPLTGRGVIQIWCLLNISENNDKSTKKKKPKSRKNPTVVNDMTCDKTDGDTTDKSTQIKKPRGRPRKNPIVVAVDDMNCAKKDGGENDKSTLIKRPRGRPRKNPTVTAVDDENCEIQDMPALAVQFPENSTEFPTPDGNHEKNEEILPKCDGGTNDKLTQIKRLRGRPGKNSIVIAVDDMNCETQNKSASDVQFAQSSTEFLASDGNLENNEKLIMYKRKNRAKENVETDENSALVKSLRRRPKSNSKGVTADDPNCNNKSMPLDIQNAEDLTEYFSKDMTLDNCNEKSVHRPRRGHESNSAMTNNSNCENEPMPLDIQVPEDSADFLSLDVAHDNCNKHSLQQYSVTKQIHTKEAVSACNTFSTTVVKNSGLKINHREGRYDQDISEPLQYDNEANYQLCSTSELEACSVPEDVTLPRVVSCLAHNGKVAWDVKWRPTNISDSSYKHRMGYLAVLLGNGSLEVWEVPLPHVLRTIYMHREGTDPRFIKLEPVFKCSMLKRRGIQSIPLTVEWSVTPPHDYLLAGCHDGTVALWKFCINSSSKCDDTMPVLCFGGDTVPIRTVAWAPFEGDPESSNIIVTAGHEGLKFWDLRNPFRPLRNLHPLPRIIYSLDWLSKPSCIIMSFEDGTMKTISLAKAANDLPVTGEIYSGKKQPGLHGSLYASFAIWSVQVSRITGMLAYCGADGTVFRFQLTTKSVEADHARNSAPRFLCGSVTEENSNLFINTPLSNAPVPWKKPPVKGRCAESFRDLLSKTNPYKNALNQVPETSIFDCDSQTLAICGGENVDLLESGSEEASYSMKQPKGPKLNKGSKKKQDEKSDFGNIPETFPPKMAALHKVRWNMNKGSERWLCFGGACGLVRCQEIVYSDIDNKLALKK* 1093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1833 1092 PANTHER RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR COMPLEX SUBUNIT 24 1079 - -
Pvu11g1833 1092 Gene3D - 521 940 IPR015943 GO:0005515
Pvu11g1833 1092 MobiDBLite consensus disorder prediction 237 281 - -
Pvu11g1833 1092 MobiDBLite consensus disorder prediction 440 478 - -
Pvu11g1833 1092 SMART WD40_4 704 750 IPR001680 GO:0005515
Pvu11g1833 1092 SMART WD40_4 868 906 IPR001680 GO:0005515
Pvu11g1833 1092 SMART WD40_4 809 848 IPR001680 GO:0005515
Pvu11g1833 1092 SMART WD40_4 631 681 IPR001680 GO:0005515
Pvu11g1833 1092 SMART WD40_4 761 805 IPR001680 GO:0005515
Pvu11g1833 1092 MobiDBLite consensus disorder prediction 502 527 - -
Pvu11g1833 1092 MobiDBLite consensus disorder prediction 294 321 - -
Pvu11g1833 1092 PRINTS AT-hook-like domain signature 274 284 IPR017956 GO:0003677
Pvu11g1833 1092 PRINTS AT-hook-like domain signature 307 318 IPR017956 GO:0003677
Pvu11g1833 1092 PRINTS AT-hook-like domain signature 375 385 IPR017956 GO:0003677
Pvu11g1833 1092 MobiDBLite consensus disorder prediction 464 478 - -
Pvu11g1833 1092 MobiDBLite consensus disorder prediction 294 309 - -
Pvu11g1833 1092 SUPERFAMILY WD40 repeat-like 646 909 IPR036322 GO:0005515
Pvu11g1833 1092 MobiDBLite consensus disorder prediction 1007 1041 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1833 Pvu-Chr11 45134053 45146869 Dispersed