Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1831 ATGAGGCTTATCCTTCACAAACTTGTGCTTGCTTTCATGCAGCTGTGGTTGTGGTTGAGTTCTTCTGTTCATGTTCATGCAGCAGATGACAGTTTAAACCCCGGTGATACATTCAACTCCTCTTCACATCTATTTTCTAAGAGTCGCAAATATCTTCTAGGATTTGAGTTTAGTAGACAAGATGATGAAATTTTTACTCACTTAGTAATACGAAATAGAGATGACGGTGCTATAGCTTGGGATTGGGAATGTAATAAAGAACAATCTGTCAACAGGAGTGATGCAGTTCTATCCCTAAACTTCTCTGGCGTGCTCAAAGTAGAATCTTCATCTCTGAAAAAACCATTTATTCTGTATTCTCCTCCTCAACCTATCAACAACACTGTGGCCACTTTGTTGGAAACAGGCAACTTTGTGCTTCAACACCTTCACCCCAATGGGACAACCACTCTCTTGTGGCAGAGTGTTAACCACAAAACAGGCCATCGTTGGTTACTTTTTTCGTACTTGACCAATGAGCGTGCGACTCCAGGTGCCTTTAGTCTTGAATGGGAACCAAAGGGACAAGAACTGATGATAAGGAGGCGAGGAAAAGTTTGTTGGAAAAGTGGGAAACTGAGGAACAATAGATTTGAGAACATCCCAGAAGATGCACAAGGCGTGTTGAACTACAGCATAGTGTCCAATGGGGATGAAGACACCTTCTCTTTCACATCTACAAATGAAAGCCATACACGTCGGTGGTTGCTATCAGATACTGGGCGGTTATATTACAATGCCAAAGATGGATATGTTGCAAGGGCTGATCTGTGTTATGGATACAACAACACAGAAGGAGGGTGCCAAAGATGGCAAGATATACCCAAGTGCAGGATTCCTGGTGATGTGTTTACCAAAAAGAGTCTTCGCTCTAGTTATGAAAAACTAACCTTTGACTATAATAAGAATATTAGTTACAGCGATTGTGAGGCTGCTTGCTGGAGCCATTGTAATTGCAATGGATTCAAACAAATCTATGATGATGGAACTGGATGTTTCTTCTATCATTGGAATTCATCAACAGATTATATAGTTGACGGCTCCGTTTCGGCTGAAGACATTTACTTACTGGAGAACAAAGGGAACATAATCCCTCATCATCAAGGTACAAAAAGGTGGATATGGATAAGTACAGTAATAGCAACTGCTTTACTCATACTATGCGCATGCATTCTATGCCACGCCATAAAGAAACGAAAACATGTACTTCAAGAGAAAAAAAGGAAAGAAATGGAGATGAAATTATCTCTAATAGAAGATTTTGGAAATGATTTGAATAAGGGACACAGTTTAAAAGTATTGGATTATACAATGGTTGTGGCATCCACAAATGGGTTTTCATCAGAAAATAAGTTAGGACAGGGAGGCTTTGGACCAGTTTATAAGGGAACTTTGCCAACAGGAGAGGAGGTTGCTATAAAAAGACTTTCAAGAAGTTCTACGCAAGGAATTGTTGAGTTTAAAAATGAACTAACACTTATATGTGAACTTCAGCACACCAATCTTGTTCAACTACTTGGTTGTTGCATTCATGAAGAAGAGAAGATTCTAATTTACGAGTATATGTCCAACAAAAGCTTGGATTTCTATCTTTTCGATTGTACAAGAAGCAAATTACTAGATTGGAATAAACGGTTCAACATAACACAGGGAATTGCTCAAGGATTATTGTATCTTCACAAGTACTCAAGACTCAAAATCATTCATAGAGACTTGAAAGCTAGTAATATACTTCTGGATGAAAATATGAATCCAAAAATTTCAGATTTTGGAATGGCTAGAATGTTCACCCAACAAGACTCAGTATCAAATACGAACAGGGTTGTTGGGACATATGGTTACATGTCTCCAGAATATGCTATGGAAGGAGTTTTTTCTACAAAGTCTGATGTGTATAGCTTTGGGGTCTTGTTGCTTGAAATTGTTAGTGGACGTAAAAACACTAGTTTTTATGATGAGGATCGCCCAATAAATCTAATTGGACATGTATGGGAACTCTGGATAGATGACAAGTGTTTTCAATCAGTGGATCCATCATTAAATGAGTCATTTGATTATGATGAAGTGCAGAGGTGTATTCATGTTGGTCTCCTCTGTGTTGAACAATATGCAAATGATCGACCAACCATGTCTGACGTTATATCAATGCTGACAAACAAGAGTGCAATAGTGTCTTTACCTAAAAAACCAGCATTTTATATTCAAAGAGAGATGTTTAATGAGAAGTTATTTTCTTCAGAGTTGTGTACTAGTTCTACAGTAGAAATTACTACTTCGTTGGAAATAGAATAA 2331 0.3805 MRLILHKLVLAFMQLWLWLSSSVHVHAADDSLNPGDTFNSSSHLFSKSRKYLLGFEFSRQDDEIFTHLVIRNRDDGAIAWDWECNKEQSVNRSDAVLSLNFSGVLKVESSSLKKPFILYSPPQPINNTVATLLETGNFVLQHLHPNGTTTLLWQSVNHKTGHRWLLFSYLTNERATPGAFSLEWEPKGQELMIRRRGKVCWKSGKLRNNRFENIPEDAQGVLNYSIVSNGDEDTFSFTSTNESHTRRWLLSDTGRLYYNAKDGYVARADLCYGYNNTEGGCQRWQDIPKCRIPGDVFTKKSLRSSYEKLTFDYNKNISYSDCEAACWSHCNCNGFKQIYDDGTGCFFYHWNSSTDYIVDGSVSAEDIYLLENKGNIIPHHQGTKRWIWISTVIATALLILCACILCHAIKKRKHVLQEKKRKEMEMKLSLIEDFGNDLNKGHSLKVLDYTMVVASTNGFSSENKLGQGGFGPVYKGTLPTGEEVAIKRLSRSSTQGIVEFKNELTLICELQHTNLVQLLGCCIHEEEKILIYEYMSNKSLDFYLFDCTRSKLLDWNKRFNITQGIAQGLLYLHKYSRLKIIHRDLKASNILLDENMNPKISDFGMARMFTQQDSVSNTNRVVGTYGYMSPEYAMEGVFSTKSDVYSFGVLLLEIVSGRKNTSFYDEDRPINLIGHVWELWIDDKCFQSVDPSLNESFDYDEVQRCIHVGLLCVEQYANDRPTMSDVISMLTNKSAIVSLPKKPAFYIQREMFNEKLFSSELCTSSTVEITTSLEIE* 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1831 776 Gene3D - 23 158 IPR036426 -
Pvu11g1831 776 SUPERFAMILY Protein kinase-like (PK-like) 444 759 IPR011009 -
Pvu11g1831 776 ProSiteProfiles Bulb-type lectin domain profile. 29 153 IPR001480 -
Pvu11g1831 776 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 205 IPR036426 -
Pvu11g1831 776 ProSitePatterns Serine/Threonine protein kinases active-site signature. 580 592 IPR008271 GO:0004672|GO:0006468
Pvu11g1831 776 Pfam Protein tyrosine and serine/threonine kinase 462 705 IPR001245 GO:0004672|GO:0006468
Pvu11g1831 776 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 11 766 - -
Pvu11g1831 776 PIRSF SRK 1 268 IPR024171 GO:0004674
Pvu11g1831 776 PIRSF SRK 259 775 IPR024171 GO:0004674
Pvu11g1831 776 CDD STKc_IRAK 465 732 - -
Pvu11g1831 776 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 11 766 - -
Pvu11g1831 776 SMART serkin_6 459 737 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1831 776 Gene3D Phosphorylase Kinase; domain 1 408 534 - -
Pvu11g1831 776 Pfam D-mannose binding lectin 82 161 IPR001480 -
Pvu11g1831 776 ProSiteProfiles Protein kinase domain profile. 459 745 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1831 776 Gene3D Transferase(Phosphotransferase) domain 1 535 741 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1831 Pvu-Chr11 45118181 45121444 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1831 421 774 Receptor kinase-like Gene Family AT4G11480 52.528 7.38e-122 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu11g1831 PK_Tyr_Ser-Thr 7.5e-51 CL0016