Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1826 ATGAGCTCAGACTACACTTCGGGAGGGACTCCGTTCTTCTTCTCCAACTTTCCCTTCGACATCAAAGAATCAGATTTGTGGAGGATTTTCCGCAGATGGGGAAGGGTAAGTGATATTTTCATATCAAGAAGGTTGAACATTAAGAAGCAAATGTTTGGTTTTGTGAGATTTCAGGGAGTACAGAATGTCAGGGAACTAAAGAATCATCTGAACACAATTTGGATTGGAAGCTGGAAACTGAAGGCTAACAGGCCGAAATACAATAGACCAGCAGAAACAAGAAAGGAATGGAATATGAAGTTGAAAGAGAAGGTTTCAGAAATAAAGAGTGAACCAAAAAAAGAATGGAGGGCCAAAGAGAAAGAAACATATGCAAACATTGTTAAGACTGGTAAAAGTATTAGTGAACAAACTCAGAATAGGTCAAGGGTGCAGGCTATTCATTTTAGAGCAGAAGAAACTCCAAGGGATTGGCTAAAAAAGTGCTACATTGGAAGAGTCTCGGATTTAAGCAAAGTATCATGTTTGAATGAATGTTTTATTTTGGAAGGTCTCAGTCATATAAAGGTTAAATTTTTGGGAGGGTTCCATGTGCTATTGATGGGGGAAAACGAAACAAAGATCCTTGAAGCGATAGAAGAAAATAAAGTATGGTTTGAAGAAATGTTTGACACCATCATTCCATGGGAAGAACAATTTGTAGCGGTGGACAAATTGGTGTGGGTGAGATGTAGGGGGCTACCGTTGAAATTATGGAATACTGACTGCTTCAAACACATAGCAGCATTAATGGGAACTCTTGTGGAGGTTGATAACGCAACGCTGGCACTGGAAGAACTTGAGTATGCAAGATTCAAAATTAGAGTAACAGTGGAATGTGAGGCAAAGTTAACCAACTACATGAGAATCAATGAAAATTTGTATCAGATATCGGTGGAGGAAGAATGCTCTGTCCCAGAACACAAACTTTGCCAATGTTAG 981 0.3914 MSSDYTSGGTPFFFSNFPFDIKESDLWRIFRRWGRVSDIFISRRLNIKKQMFGFVRFQGVQNVRELKNHLNTIWIGSWKLKANRPKYNRPAETRKEWNMKLKEKVSEIKSEPKKEWRAKEKETYANIVKTGKSISEQTQNRSRVQAIHFRAEETPRDWLKKCYIGRVSDLSKVSCLNECFILEGLSHIKVKFLGGFHVLLMGENETKILEAIEENKVWFEEMFDTIIPWEEQFVAVDKLVWVRCRGLPLKLWNTDCFKHIAALMGTLVEVDNATLALEELEYARFKIRVTVECEAKLTNYMRINENLYQISVEEECSVPEHKLCQC* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1826 326 PANTHER RNA RECOGNITION MOTIF 11 300 - -
Pvu11g1826 326 CDD RRM_SF 13 83 - -
Pvu11g1826 326 Pfam Domain of unknown function (DUF4283) 183 287 IPR025558 -
Pvu11g1826 326 Gene3D - 10 123 IPR012677 -
Pvu11g1826 326 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 10 87 IPR000504 GO:0003723
Pvu11g1826 326 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 11 300 - -
Pvu11g1826 326 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 15 77 IPR000504 GO:0003723
Pvu11g1826 326 SMART rrm1_1 11 83 IPR000504 GO:0003723
Pvu11g1826 326 SUPERFAMILY RNA-binding domain, RBD 13 152 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1826 Pvu-Chr11 45075074 45076054 Transposed