Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1823 ATGAGGCTTATCCTTCAGAAACTTGTGCTTGCTTTCATGCACCTGTGGTTGTGGTGGAGTTCTTCTATTCATGTTGATGCAGCAGATGACAGTTTAAACCCCGGTGATACATTCAACTCCTCTTCACAACTATATTCTAAGAGTCGCAATTATTTTCTGGATTTTTATTCGCTTTTAAGTGGAGGTGAATTTTTTACTTACTTAGCAATACAAAATGCACATGACAATACTATAGTTTGGGACGCAAATAAAGAACAATCTGTCCACCAGAACGATGCAGTTCTATCCTTAAACTTCTCTGGCGTGCTGAAAATAGAATATCCATCTGTGAATAAACCAATTATTCTGTATTCTCCACCTCAACCTATCAACAACACTGTGGCCACTTTGTTGGACACAGGCAACTTTGTTCTTCAACACCTTCACTCCAATGGGACAACCACTCTCTTGTGGCAGAGTTTTGATTATCCCACCAACACTTTGATCCCCACCATGAAGTTAGGCGTTAATCACAAAACAGGCCATCGTTGGTTACTTTTTTCGTACTTGACCGAAGGGCGTGCGACTCCAGGTGGCTTTAGTCTTGAATGGGAACCAAAGGGACAAGAACTGATGATAAGGAGGCGAGGAAAAGTTTGTTGGAAAAGTGGGAAACTGAGGAACAATAGATTTGAGCACATTCCAGAAGATGCACAAGGCGTGTTGAACTACAGCATAGTGTCTAATGGGAATGAAGACAGCTTCTCTTTCACATCTACAAATGAAAACATTACATATTTCTGGTCCTTATCGGATACTGGACGGTTATATTACGATGACAAAGAGGGATATGTTGCAAGGGCTGATCTGTGTTATGGATACAACAACACAGATGGAGGGTGCCAAAGATGGCAGGATATACCTAAATGCAGGATTCCTGGTGATGTCTTTACCAAAAAGAGTCTTTACCCTAATTATGAAAATGTAACCTATGAAGAAAATGAGAATATTAGTCACAGTGATTGTGAGGCTGCTTGCTGGAGCAATTGTAATTGCAGTGGATTCAAAGAACTCTATACAGATGGAAGTGGATGTAGATTCTATCAATGGAATTCATCAAAAGATTATATAGTTGACGGCACTGTTTCGGGTGAAGACTTTTACGTACTTGAGAACAAAAGGAACATAATCCCTCATCATCACGGTACAAAAGGGTGGATATGGATAAGTACAGTAATAGCTACTACTTTACTCATAATTTGCGCGTTGATTCTATGCCTGGCAATAAAGAAACGAAAACATGTGCTTCAAGAGAAGAAAAGGAAAGAAATGACTCTAATGGAAGATTTTGGAAATGATTTGAATAAGAAACACGGTTTAAAAGTATTGGATTATTCATTGGTTGTGGCAGCTACAAATGAGTTTTCATCAGAGAATAAGTTAGGACAGGGAGGCTTTGGACCAGTTTATAAGGGAACTTTACCAACAGGAGAGGAGGTTGCTATAAAAAGACTTGCAAGAAGTTCTGCACAAGGAATCGTTGAGTTCAAAAATGAACTAACACTGATATGTGAACTTCAGCACATGAATCTTGTTCAACTACTTGGTTGTTGCATTCATGAAGAAGAGAAGATTCTAATTTATGAGTATATGCCCAACAAAAGCTTGGATTTCTATCTTTTCGATGGTACAAGAAGCAAATTACTAGATTGGAATAAGCGTTTCAGCATAATACAAGGAATTGCTCAAGGATTATTGTATCTTCACAAGTACTCAAGACTCAAAGTCATTCATAGAGACTTGAAAGCTAGTAACATACTTCTTGATGAAAATATGAATCCAAAAATTTCAGATTTTGGAATGGCTAGAATGTTTACTCAACAAGACTCGATATCAAATACGAACAAAGTTGTTGGGACATATGGTTATATGTCTCCAGAATATGCTATGGAAGGAGTTTTTTCTACAAAGTCTGATGTGTATAGCTTTGGAGTATTGTTGCTTGAAATAGTTACAGGAAGAAAAAACACTAGTTTTTATGATGATGATCACCCTTTGAATCTAGTTGGACATGTATGGGAGTTATGGAAAGATGACAAATATTTTGAATTAGTGGATCCATCACTAAATGAGGTATTTGATCATGAGGAAGTGCAAAGGTGTATTCATATTGGCCTCTTATGTGTTGAACATTATGCAAATGATCGACCCACAATGAGTAACATTATATTAATGTTAACAAGCAAGAGTGAAATAGTGTCCTTACCTCAAATACCAGCATTCTATGTTCAAAGAAATCACTGCTTCTACAGTAGAAACGATTACTTCTACTGA 2313 0.3748 MRLILQKLVLAFMHLWLWWSSSIHVDAADDSLNPGDTFNSSSQLYSKSRNYFLDFYSLLSGGEFFTYLAIQNAHDNTIVWDANKEQSVHQNDAVLSLNFSGVLKIEYPSVNKPIILYSPPQPINNTVATLLDTGNFVLQHLHSNGTTTLLWQSFDYPTNTLIPTMKLGVNHKTGHRWLLFSYLTEGRATPGGFSLEWEPKGQELMIRRRGKVCWKSGKLRNNRFEHIPEDAQGVLNYSIVSNGNEDSFSFTSTNENITYFWSLSDTGRLYYDDKEGYVARADLCYGYNNTDGGCQRWQDIPKCRIPGDVFTKKSLYPNYENVTYEENENISHSDCEAACWSNCNCSGFKELYTDGSGCRFYQWNSSKDYIVDGTVSGEDFYVLENKRNIIPHHHGTKGWIWISTVIATTLLIICALILCLAIKKRKHVLQEKKRKEMTLMEDFGNDLNKKHGLKVLDYSLVVAATNEFSSENKLGQGGFGPVYKGTLPTGEEVAIKRLARSSAQGIVEFKNELTLICELQHMNLVQLLGCCIHEEEKILIYEYMPNKSLDFYLFDGTRSKLLDWNKRFSIIQGIAQGLLYLHKYSRLKVIHRDLKASNILLDENMNPKISDFGMARMFTQQDSISNTNKVVGTYGYMSPEYAMEGVFSTKSDVYSFGVLLLEIVTGRKNTSFYDDDHPLNLVGHVWELWKDDKYFELVDPSLNEVFDHEEVQRCIHIGLLCVEHYANDRPTMSNIILMLTSKSEIVSLPQIPAFYVQRNHCFYSRNDYFY* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1823 770 CDD STKc_IRAK 474 740 - -
Pvu11g1823 770 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 10 758 - -
Pvu11g1823 770 ProSiteProfiles Protein kinase domain profile. 468 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1823 770 ProSitePatterns Serine/Threonine protein kinases active-site signature. 589 601 IPR008271 GO:0004672|GO:0006468
Pvu11g1823 770 ProSiteProfiles Bulb-type lectin domain profile. 29 151 IPR001480 -
Pvu11g1823 770 SMART serkin_6 468 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1823 770 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 181 IPR036426 -
Pvu11g1823 770 Gene3D Phosphorylase Kinase; domain 1 424 543 - -
Pvu11g1823 770 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 10 758 - -
Pvu11g1823 770 Pfam Protein tyrosine and serine/threonine kinase 471 737 IPR001245 GO:0004672|GO:0006468
Pvu11g1823 770 Gene3D - 23 154 IPR036426 -
Pvu11g1823 770 SMART blect_4 35 157 IPR001480 -
Pvu11g1823 770 SUPERFAMILY Protein kinase-like (PK-like) 453 760 IPR011009 -
Pvu11g1823 770 Pfam D-mannose binding lectin 77 181 IPR001480 -
Pvu11g1823 770 PIRSF SRK 275 768 IPR024171 GO:0004674
Pvu11g1823 770 PIRSF SRK 1 281 IPR024171 GO:0004674
Pvu11g1823 770 Gene3D Transferase(Phosphotransferase) domain 1 544 748 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1823 Pvu-Chr11 45053976 45058051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1823 397 757 Receptor kinase-like Gene Family AT4G23230 50.970 2.43e-121 376
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu11g1823 PK_Tyr_Ser-Thr 1e-50 CL0016