Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1822 ATGAGGCTTATCTTTCAGAAACTTGTGCTTGCTTTCATGCAGCTGTGGTTGTGGTGGAGTTCTTCTATCCATGTTGATGCAGCAGATGACAGTTTAAACCCTGGTGATACAATCAACTCCTCTTTGCATCCACTGTATTCTAAGAGTAACAAATATCTTTTAGCATTTATTAAGATTGGAGGTCAAGTTGATTCTTTTCCTTACTTAGCAATAATGAGTGAGTATGACAATGCTATAGTTTGGGACGCTAATCAAGAACAATCTATCGACGACAGCGATGCAGTTCTATCCTTAAATTTATCTGGCGTGCTGAAAATAGAATATGCATCTGTGAAAAAACCAATTATTCTGTATTCTCCACCTCAACCTATCAACAACACTGTGGCCACTTTGTTGGACACAGGCAACTTTGTGCTTCAACACCTTCACCCCAATGGGACAAACACTCTCTTGTGGCAGAGTTTTGATTATCCCACCAACACTTTGATCCCCACCATGAAGTTAGGTGTTAATCACAAAACAGGCCATCGTTGGTTACTTTTTTCGCAGTTGACCTATGGGAGTGCGACTCGAGGTGCCTTTAGTCTTGAATGGGAACCGAGGGAACAAGAACTGATGATAAGGAGGCGAGGAAAAGTTTGTTGGAAAAGTGGGAAAGTGAGGAACAATAGATTTGAGAACATCCCAGAAGATGCACAAGGCGTGTTGAAGTACAGCATAGTGTCCAATGGGGATGAAGACACCTTCTCCTTCACATCTAAAAATGAAAGCCATACACGTCGGTGGTTCCTATCGGATACTGGGCAGTTATCTTGCAATTACAACGAGGGAGACGTTGCAAGAGCTGATCTGTGTTATGGATACAACAACACAGAAGGAGGGTGCCAAAGATGGCAGGATATACCTAAATGCAGGATTCCTGGTGATGTCTTTACCAAAAAGATTCTTCGCTCTAATTATCAAAACGTAACAGCTGACGAGAATGAGAATATTAGTTACAGCGATTGTGAGGCTGCTTGCTGGAGCGATTGTTATTGCAATGGATTCAAAGAATTCTCTAATGATGGAAATTATATAGTTGAAGCCACTGTTTCGGGTGAAGACATTTACTTACTTGAGAACAAAGGGAACATAATTCCTCATCATCAGGGTACTAAAAGGAGGATATGGATAAGTACAGGAATAGCAACTACTTTACTCATAATATGCGCATCCATTCTATGCCTGGCAATAAAGAAACGAAAACATGTGCTTCAAGAGAAGAAAAGGAAAGAAATGAGTCTAATCGAAGATTTAGGAAATGATTTGAATAAGAAATACGGTTTAAAAGTATTGGATTATACATTGGTTGTGGCAGCTACAAATGAGTTTTCATCAGAGAATAAGTTAGGACAGGGAGGCTTTGGACCAGTTTATAAGGGAACATTGCCAACAGGAGAGGAAGTTGCTATAAAAAGACTTGCAAGAAGTTCTACACAAGGAATGGTTGAGTTTAAAAATGAACTAACACTTATATGCGAACTTCAGCACATGAATCTTGTTCAACTACTTGGTTGTTGCATTCATGAAGAAGAGAAGATTCTAATTTACGACTATATGTCCAACAAAAGCTTAGATTTCTATCTTTTCGATTGTACAAGAAGCAAATTACTCGATTGGAATCGGCGCTTTAGCATAATAAAAGGGATTGCTCAAGGATTATTGTATCTTCACAAGTACTCAAGACTAAAAGTCATTCATAGAGACTTGAAAGCTAGTAACATACTTCTTGATGAAAATATGAATCCAAAAATATCAGATTTTGGAATGGCTAGAATGTTTACTCAACAAGACTCGATATCAAATACGAACAGGGTTGTTGGGACATATGGTTATATGTCTCCAGAATATGCTATGGAAGGAATATTTTCTACGAAGTCTGATGTGTACAGTTTTGGCGTATTGTTGCTTGAAATAGTTAGTGGAAGAAAAAACACAAGTTTTTATGACGATGATCACCCTTTGAATCTAGTTGGACATGTATGGGAGTTGTGGAAAGATGACAAATATTTTGAATTAGTGGATCCATCACTAAATGAGGTATTTGATCACGAGGAAGTGCAAAGGTGTATTCATATTGGTCTCTTATGTGTTGAGCATTATGCAAATGATCGACCCACAATGAGTGACATTATATTAATGTTGACAAGCAAGAGCCCAATAGTGTCCTTACCTCAAAAACCAGCATTCTATGTTCAAAGTAGAAATTACTTCTTCTACAGTAGAAATGACTACTTCTACCTAAATATTTATGTACTGATTTTGAAAGAAAGTAAAATGACTACTTTTACATAA 2334 0.3783 MRLIFQKLVLAFMQLWLWWSSSIHVDAADDSLNPGDTINSSLHPLYSKSNKYLLAFIKIGGQVDSFPYLAIMSEYDNAIVWDANQEQSIDDSDAVLSLNLSGVLKIEYASVKKPIILYSPPQPINNTVATLLDTGNFVLQHLHPNGTNTLLWQSFDYPTNTLIPTMKLGVNHKTGHRWLLFSQLTYGSATRGAFSLEWEPREQELMIRRRGKVCWKSGKVRNNRFENIPEDAQGVLKYSIVSNGDEDTFSFTSKNESHTRRWFLSDTGQLSCNYNEGDVARADLCYGYNNTEGGCQRWQDIPKCRIPGDVFTKKILRSNYQNVTADENENISYSDCEAACWSDCYCNGFKEFSNDGNYIVEATVSGEDIYLLENKGNIIPHHQGTKRRIWISTGIATTLLIICASILCLAIKKRKHVLQEKKRKEMSLIEDLGNDLNKKYGLKVLDYTLVVAATNEFSSENKLGQGGFGPVYKGTLPTGEEVAIKRLARSSTQGMVEFKNELTLICELQHMNLVQLLGCCIHEEEKILIYDYMSNKSLDFYLFDCTRSKLLDWNRRFSIIKGIAQGLLYLHKYSRLKVIHRDLKASNILLDENMNPKISDFGMARMFTQQDSISNTNRVVGTYGYMSPEYAMEGIFSTKSDVYSFGVLLLEIVSGRKNTSFYDDDHPLNLVGHVWELWKDDKYFELVDPSLNEVFDHEEVQRCIHIGLLCVEHYANDRPTMSDIILMLTSKSPIVSLPQKPAFYVQSRNYFFYSRNDYFYLNIYVLILKESKMTTFT* 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1822 777 ProSitePatterns Serine/Threonine protein kinases active-site signature. 578 590 IPR008271 GO:0004672|GO:0006468
Pvu11g1822 777 Pfam D-mannose binding lectin 79 182 IPR001480 -
Pvu11g1822 777 ProSiteProfiles Protein kinase domain profile. 457 735 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1822 777 SMART blect_4 36 158 IPR001480 -
Pvu11g1822 777 PIRSF SRK 1 282 IPR024171 GO:0004674
Pvu11g1822 777 PIRSF SRK 270 760 IPR024171 GO:0004674
Pvu11g1822 777 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 182 IPR036426 -
Pvu11g1822 777 Gene3D Transferase(Phosphotransferase) domain 1 533 736 - -
Pvu11g1822 777 ProSiteProfiles Bulb-type lectin domain profile. 23 152 IPR001480 -
Pvu11g1822 777 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 10 750 - -
Pvu11g1822 777 SMART serkin_6 457 735 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1822 777 CDD STKc_IRAK 463 729 - -
Pvu11g1822 777 Pfam Protein tyrosine and serine/threonine kinase 460 726 IPR001245 GO:0004672|GO:0006468
Pvu11g1822 777 Gene3D Phosphorylase Kinase; domain 1 412 532 - -
Pvu11g1822 777 SUPERFAMILY Protein kinase-like (PK-like) 442 761 IPR011009 -
Pvu11g1822 777 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 10 750 - -
Pvu11g1822 777 Gene3D - 23 155 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1822 Pvu-Chr11 45038293 45041641 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1822 398 747 Receptor kinase-like Gene Family AT3G45860 51.989 9.34e-121 376
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu11g1822 PK_Tyr_Ser-Thr 1.1e-49 CL0016