Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1821 GTTATATTTTCTATTAAGTCTGATGTGTACAGCTTTGGAGTGTTGTTGCTTGAAATAGTTAGTGGAAGAAAAAACACAAGTTTTTATGATGATGACCATCCTTTGAATCTAGTTGGACATGTATGGGAATTATGGAAAGATGACAAGTATTTTGAATTAGTGGATCTATCATTAAACGAGGAAGTGCAAAGATGTATTCATATTGGTCTCTTATGTGTTGATCATTATGCAAATGATCGACCCACAATGAGTGAAATTTTATCAAGATTAACAAACAAGAGTGCGATAGTATCCTTACCTCAAAGACCAACATTCTATGTTCAAAGGTATATGTATCCTGAAAATTTATCTTCCTTTGAATTGTGTACTGATTCTACAGTACAAATTACCTCTTCTACAGTAGAAACAATTGCTTCTACCTGA 423 0.3286 VIFSIKSDVYSFGVLLLEIVSGRKNTSFYDDDHPLNLVGHVWELWKDDKYFELVDLSLNEEVQRCIHIGLLCVDHYANDRPTMSEILSRLTNKSAIVSLPQRPTFYVQRYMYPENLSSFELCTDSTVQITSSTVETIAST* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1821 140 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 2 105 - -
Pvu11g1821 140 SUPERFAMILY Protein kinase-like (PK-like) 3 117 IPR011009 -
Pvu11g1821 140 Pfam Protein tyrosine and serine/threonine kinase 3 90 IPR001245 GO:0004672|GO:0006468
Pvu11g1821 140 Gene3D Transferase(Phosphotransferase) domain 1 2 117 - -
Pvu11g1821 140 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 2 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1821 Pvu-Chr11 45028768 45029270 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1821 3 140 Receptor kinase-like Gene Family AT4G11460 44.805 7.74e-33 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu11g1821 PK_Tyr_Ser-Thr 2.4e-06 CL0016