Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1820 ATGACCCTCCATCACATGTTATTACTATTTCCATGTTTACAGAAGGTGCTTGCTTTCATGTGCTTGTGCTTGTGGTGGAGTACTTGTATTCGTGTTGAAGCAGCAAATGACAGTTTAAAGCCTGGTGATACACTGAACTTAGATACAGGACCACTATATTCAAAAAAGGGCGACTATTGTCTAGGTTTTGGTTGGGTTGATGTTGGTGACAACCAGTATTTGTTTGTATCCAATGTAAATAATAATTATGTAGTTTGGATGAGTGATAGAAACCAACCTGTGGACAAGGATTCTGCAGTTCTGTCACTTAACCGCTCAGGCGTGCTGAAAATTGAATCTCAACGTGGGAAGCCAATAATCCTGTATTCTCCACCTCAACCTATCAACAACACTAAGGCCACCTTGTTGGACACAGGCAACTTTGTTCTTCAACACCTTCACTCCAATGGGACAAACACTCTCTTGTGGCAGAGTTTTGATTATCCCACTCACAATCTCATCCCCACCATGAAGTTAGGTGTTAACCACAAAACAGGCCATCATTGGTTACTGGTTTCATTTTTTACCAAAACACTTGCCACTCCAGGTGCCTTTAGCCTTGAATGGGAACCTGTGGAACAAGAATTGATCATAAAGAGACGGGGAAAAGTTTGCTGGGAAAGTGGGAAACTGAGGAACAATAGATTTGAGAACATTCCAGAAGATGCACAAGCCGTGTTGAAGTACAGCATAGTGTCCAATGAGGATGAAGACACCTTCTCTTTCACATCTACAAATGAAAACCCTAACCTATACTGGATTTTGACAGAATTTGGCCAGATATCTGATGATGAAGGATATGTTGCAAGGGCTGATTTGTGTTATGGATATAACAACACAGATGGAGGGTGCCAAAGATGGCAGGATATACCCAAGTGTAGGAATCCTGGTGATGTGTTCCAGAAAAAGACTGGTTCATTCAATTATCAAAATGTAAGCATTGAAGAAAATATAAGTTATGGTTACAGTGATTGTGAGGCCAGTTGCTGGAGCAATTGTAGTTGCAGTGCATTCAGAGAATTGTATCCTAATGGAACTGGATGCATATTCTTTCACTGGATTTCCGGGGAAAATTATACTTTTGATAGTACTGGTGAAAACTTTTACTTGCTGGAGAACATGTTAACTAATCATAAGGGTACAAAAAAGTGGATATGGATAGGCGCAGTACCAGCAACTGCTCTACTTGCAATTTTCCTATTCACTATTTGCCTAGCCTTCAAGAAACGAAAATTCGTGTTTCAAGGGAAAAAAAGGCAAAGGATGGTGATGAAGATGCTACATTTGGCAACTTGTAGTCGGTCATCTGCAATGAAAGATTTTGAAGTTGATTTGAAAAAGGGAAATGGCCTAAAACTGTTTAATTATACATCAATTATGGCAGCAACAAATGAATTTTCAACTGAGAATAAGTTAGGACAAGGAGGCTTTGGACCCGTTTATAAGGTGACTTGA 1494 0.3983 MTLHHMLLLFPCLQKVLAFMCLCLWWSTCIRVEAANDSLKPGDTLNLDTGPLYSKKGDYCLGFGWVDVGDNQYLFVSNVNNNYVVWMSDRNQPVDKDSAVLSLNRSGVLKIESQRGKPIILYSPPQPINNTKATLLDTGNFVLQHLHSNGTNTLLWQSFDYPTHNLIPTMKLGVNHKTGHHWLLVSFFTKTLATPGAFSLEWEPVEQELIIKRRGKVCWESGKLRNNRFENIPEDAQAVLKYSIVSNEDEDTFSFTSTNENPNLYWILTEFGQISDDEGYVARADLCYGYNNTDGGCQRWQDIPKCRNPGDVFQKKTGSFNYQNVSIEENISYGYSDCEASCWSNCSCSAFRELYPNGTGCIFFHWISGENYTFDSTGENFYLLENMLTNHKGTKKWIWIGAVPATALLAIFLFTICLAFKKRKFVFQGKKRQRMVMKMLHLATCSRSSAMKDFEVDLKKGNGLKLFNYTSIMAATNEFSTENKLGQGGFGPVYKVT* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1820 497 SMART blect_4 36 162 IPR001480 -
Pvu11g1820 497 Pfam PAN-like domain 332 364 IPR003609 -
Pvu11g1820 497 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 15 495 - -
Pvu11g1820 497 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 184 IPR036426 -
Pvu11g1820 497 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 15 495 - -
Pvu11g1820 497 Gene3D - 30 159 IPR036426 -
Pvu11g1820 497 Gene3D Phosphorylase Kinase; domain 1 437 497 - -
Pvu11g1820 497 ProSiteProfiles Bulb-type lectin domain profile. 36 156 IPR001480 -
Pvu11g1820 497 Pfam D-mannose binding lectin 84 186 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1820 Pvu-Chr11 45013408 45016537 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1820 395 495 Receptor kinase-like Gene Family AT5G10530 31.683 1.70e-07 52.0