Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1818 ATGACCCTCCTTCACATGTTCTTATTATTTCCATGTTTCAAGCATGCTATGAGGCATAAGCTACAGAAGCTGCTTGCTTTCATGTGCTTGTGCTTGTGGTGGAGTACTTGTATTCATGTTGAAGCAGCAAATGACAGTTTAAATCCTGGTGATACACTGAACTCAGATACAGGAACATTATGTTCAAAAAAGAGCAAATATTGTCTAGATCTTCCTTCGTCGAATGTTGATGACAACCAATATCTGGTTGTATCCACTGTAAATAAAAATATTGTAGTTTGGACAAGTGATGTAAACCAACCTGTTCACGGAGATTCTGCAGTTCTGTCACTTAACCGCTCAGGTGTGCTGAAAATTGAATCTGAACGTGGGAAGCCAATAATCCTGTATTCTCCACCTCAACCTATCAACAACACTAAGGCCACCTTGTTGGACACAGGCAATTTTGTACTTCAACAACTTCACCCCAATGGGACAAACACTCTCTTGTGGCAGAGTTTTGATTATCCCATTGACACTTTGATCCCCACCATGAAGTTAGGTGTTAATCACAAAACAGGCCATCATTGGTTACTGGTTTCATCTTTGGCCAACACACTTGGCACTCCCGGTGCCTTTAGCCTTGAATGGAAACCTGTGGGACAAGAATTGATCATAAGGAGACGGGGAAAAGTTTGCTGGAAAAGTGGGAAACTGAGGAACAATAGATTTGAGCACATTCCAGAGGATGCACAACGCAGGTTGAATTATACCATTGTGTCTAATGGGGATGAAAACTCCTTCTCTTTCATAACTACAAATGAAGAGCCTGACATAATGTGGATTTTCTCAGAAACTGGGCAGATATCTGATGGTAAAGGATATGTTGCAAGGGCTGATTTGTGTTATGGATATAACACAGATGGAGGGTGCCAAAGATGGCAGGATATACCCAAGTGTAGGAATCCTGGTGATGTGTTCCAGAAAAAGACTGGTTACTTCAATTATCAGAATACAAGCATTGAAGGAAATATAAGTTATGGTTACAGTGATTGTGAGGCCAATTGCTGGAGCAATTGTAATTGCACTGCATTCAGAGAAATGTATTCTAATGGAACTGGATGCATATTCTTTCACTGGATTTCCGCGGATAATTATACTTTTGATAGTACTGGTGAAAACTTTTACTTGCTGGTGAACATGTTAACTAATCATAAGGGTACAAGAAAGTGGATATGGATAGGTGCAGTAGCAGCAACTGCTCTACTTGCAATTTGCCTATTCACTATTTGCCTAGCCTTAAAGAAACGAAAATTCGTGTTTCAAGAGAAGAAAAGGCAAAGGATGGTGATGAAGATGGTACATTTGGCAACTTGTAGTCGGTCATCTGCAATGGAAGATTTTGAAGTTGATTTAAAAAAAGGAAATGGCCTAAAATTGTTTAATTATACATCAGTTATGGCAGCAACAAATGGATTTTCACCTGAGAATAAGTTAGGACAAGGAGGCTTTGGACCCGTTTATAAGGGAATTCTTCCAACCGGCCAAGAGATTGCTGTAAAAAGACTTTCAAAAACATCTGGACAAGGAATTGTGGAGTTTAAGAATGAACTAACACTAATATGTGAACTTCAGCATATGAATCTTGTGCAACTACTTGGTTGTTGCATTGACGAAGAAGAGAGGATTCTAATTTATGAGTATATGTCAAATAAAAGTTTGGATTTCTATCTATTCGATTGTACAAGAGGCAAATTACTAGATTGGAAGAAGCGGTTCAAAATAATAGAAGGAATTTCCCAAGGATTACTTTATCTTCATAAGTACTCAAGACTCAAAATCATCCATAGGGACTTGAAAGGTAGCAATATTCTTTTAGATGAAAATATGAATCCAAAAATATCAGATTTTGGGATGGCAAGAATATTCACACAAGAATCTGTCTCAAATACCAATAGAATTGTTGGGACACATGGTTACATGTCTCCAGAATATATGATGGAAGGAGTTTTCTCTACAAAGTCTGACGTTTATAGTTTTGGAGTGTTGCTACTTGAAATTGTTAGTGGAAGAAGAAGCCTTGGTTGTTATGGTGTTGATCGGCCATTAAATCTGATAGGACATACATGGGAGTTATGGAAAGATGGTGCATCTTTAGAGTTAGTGGATCCATCAATAAACAAGTCATTTGATCCTGAAGAAGTGCAAAGATGCATTCATATTGGTCTCTTGTGTGTACAACATTATGCAGATGATCGACCAACCATGTCTGACATTGTATCAATGTTGACAAACAAAAGTGCAATAGTTTCCTTACCTGAAAGACCAGCATTCTATGTTGGAAGAAAGATCATTCATGATGAATTATCTTCAAAGGGGTTCTGTACTGATTCTACAATAGAGATCGCAGCATCAACTGTAGAAATTACATCATCTACAATAGACATGACTGATTCCTAA 2439 0.3805 MTLLHMFLLFPCFKHAMRHKLQKLLAFMCLCLWWSTCIHVEAANDSLNPGDTLNSDTGTLCSKKSKYCLDLPSSNVDDNQYLVVSTVNKNIVVWTSDVNQPVHGDSAVLSLNRSGVLKIESERGKPIILYSPPQPINNTKATLLDTGNFVLQQLHPNGTNTLLWQSFDYPIDTLIPTMKLGVNHKTGHHWLLVSSLANTLGTPGAFSLEWKPVGQELIIRRRGKVCWKSGKLRNNRFEHIPEDAQRRLNYTIVSNGDENSFSFITTNEEPDIMWIFSETGQISDGKGYVARADLCYGYNTDGGCQRWQDIPKCRNPGDVFQKKTGYFNYQNTSIEGNISYGYSDCEANCWSNCNCTAFREMYSNGTGCIFFHWISADNYTFDSTGENFYLLVNMLTNHKGTRKWIWIGAVAATALLAICLFTICLALKKRKFVFQEKKRQRMVMKMVHLATCSRSSAMEDFEVDLKKGNGLKLFNYTSVMAATNGFSPENKLGQGGFGPVYKGILPTGQEIAVKRLSKTSGQGIVEFKNELTLICELQHMNLVQLLGCCIDEEERILIYEYMSNKSLDFYLFDCTRGKLLDWKKRFKIIEGISQGLLYLHKYSRLKIIHRDLKGSNILLDENMNPKISDFGMARIFTQESVSNTNRIVGTHGYMSPEYMMEGVFSTKSDVYSFGVLLLEIVSGRRSLGCYGVDRPLNLIGHTWELWKDGASLELVDPSINKSFDPEEVQRCIHIGLLCVQHYADDRPTMSDIVSMLTNKSAIVSLPERPAFYVGRKIIHDELSSKGFCTDSTIEIAASTVEITSSTIDMTDS* 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1818 812 PIRSF SRK 286 809 IPR024171 GO:0004674
Pvu11g1818 812 PIRSF SRK 15 291 IPR024171 GO:0004674
Pvu11g1818 812 Pfam D-mannose binding lectin 92 194 IPR001480 -
Pvu11g1818 812 SUPERFAMILY alpha-D-mannose-specific plant lectins 91 195 IPR036426 -
Pvu11g1818 812 ProSitePatterns Serine/Threonine protein kinases active-site signature. 607 619 IPR008271 GO:0004672|GO:0006468
Pvu11g1818 812 Gene3D Transferase(Phosphotransferase) domain 1 562 765 - -
Pvu11g1818 812 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 23 794 - -
Pvu11g1818 812 ProSiteProfiles Protein kinase domain profile. 486 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1818 812 Gene3D Phosphorylase Kinase; domain 1 445 561 - -
Pvu11g1818 812 SMART blect_4 44 170 IPR001480 -
Pvu11g1818 812 CDD STKc_IRAK 492 758 - -
Pvu11g1818 812 Pfam PAN-like domain 338 371 IPR003609 -
Pvu11g1818 812 Gene3D - 38 167 IPR036426 -
Pvu11g1818 812 ProSiteProfiles Bulb-type lectin domain profile. 44 164 IPR001480 -
Pvu11g1818 812 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 23 794 - -
Pvu11g1818 812 Pfam Protein tyrosine and serine/threonine kinase 489 756 IPR001245 GO:0004672|GO:0006468
Pvu11g1818 812 SUPERFAMILY Protein kinase-like (PK-like) 471 774 IPR011009 -
Pvu11g1818 812 SMART serkin_6 486 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1818 Pvu-Chr11 44976869 44981059 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1818 464 782 Receptor kinase-like Gene Family AT3G45860 57.453 1.59e-123 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu11g1818 PK_Tyr_Ser-Thr 4.7e-47 CL0016