Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1816 ATGACCCTCTTTCACATGTTCTTATTATTTCCATGTTTGAAGCATGCTATGAGGCATAAGCTACAGAAGGTGCTTGCTTTCATGTGCTTGTGCTTGTGGTGGAGTACTTGCATTCATGTTGAAGCAGCAAATGACAGTTTAAAGCCTGGTGATACATTGAACTTAGATACAGGACCAGTATATTCAAAAAAGGGCAACTATTATCTATGTTTTGGTTGGCTTGATGTTGGTTACAACCAGTATTTGTTTTTATCAGATATAAATAATAATTATGTAGTTTGGATGAGTGATAGAAACCAACCTGTTGCCGGGGATTCTGCAGTTCTGTCACTTAACCTCTCAGGTGTGCTGAAAATTGAATATCAACGTGGGAAGCCAACAATCCTGTATTCTCCACCTCAACCTATCAACAACACTAAGGCCACCTTGTTGGACACAGGCAATTTTGTCCTTCAACAACTTCACCCCAATGGGACAAACACTCTCTTGTGGCAGACTTTTGATTATCCCATGGACACTTTGATCCCCACCATGAAGTTAGGTGTTAATCACAAAACAGGCCATCATTGGTTACTGGTTTCATCTTTGACCAAAACACTTGTCAATTCTGGTGCCTTTAGCCTTGAATGGGAACCTGTGGGACAAGAATTGATCATAAGGAGACGGGGAAAAGTTTGTTGGAAAAGTGGGAAACTGAGGAACAATAGATTTGAGAACATTCCAGAAGATGCACAAGGCGTGTTGAAGTACAGTATAGTGTCGAATGGGGATGAAGAGACCTTCTCTTTCACATCTACAAATGAAAACATTACACATTTCTGGTCCTTATCGGATACTGGGCGGTTATATTACAATGACAAAGAGGGTTATGTTGCAACGGCTGATCTGTGTTATGGGTACAACACAGATGGAGGGTGCCAAAGATGGCAGGATATACCCAAGTGTAGGAATCCTGGTGATGTGTTCCAGAAAAAGACTGGTTACATCAGTTATCAGAATGTAAGTCTTGAAGGAAATATAAGTTATGGTTTCAGTGATTGTAAGGCCAGTTGCTGGAGCAATTGTCATTGCAGTGCATTCAGAAAAATGTATTCTAATGGAACTGGATGCATATTCTTTCACCGGATTTCCGCGGAAAATTATACTTTTGATAGTGCTGGTGAAAACTTTTACTTGCTGGAGAACATGTTAACTAATCATAAGGGTACAAAAAAGTGGATATGGATAGGTGCAGTAGCAGCAACTGCTCTACTTGCAATTTTCCTATTCACTATTTGCCTAGCCTTCAAGAAACGAAAATTCGTGTTTCAAGGGAAAAAAAGGCAAAGGATGGTGATGAAGATGCTACATTTGGCAACTTGTAGTCGGTCATCTGCAATGAAAGATTTTGAAGTTGATTTGAAAAAGGGAAATGGCCTAAAACTGTTTAATTATACATCAATTATGGCAGCAACAAATGAATTTTCAACTGAGAATAAGTTAGGACAAGGAGGCTTTGGACCCGTTTATAAGGGAATTCTTCCAACCGGCCAAGAGATTGCTGTAAAAAGACTTTCAAAAACATCTGGACAAGGAATTGTGGAGTTTAAGAATGAACTAACACTAATATGTGAACTTCAGCATATGAATCTTGTGCAACTACTTGGTTGTTGCATTGACGAAGAAGAGAGAATTCTAATTTATGAGTATCTGCCAAATAAAAGTTTGGATTTCTATCTATTCGATTGTACAAGAGGCAAATTACTAGATTGGAAGAAGCGGTTCAAAATAATAGAAGGAATTTCTCAAGGATTACTCTATCTTCATAAGTACTCAAGACTCAAAATCATCCATAGGGACTTGAAAGCTAGCAATATTCTTTTAGATGAAAATATGAGTCCAAAAATATCAGATTTTGGGATGGCAAGAATATTCACACAAGAATCAGTCGCAAATACCAACAGAATTGTTGGGACACATGGTTACATGTCTCCAGAATATATGATGGAAGGAGTTTTCTCTCCAAAGTCTGACGTTTATAGTTTTGGAGTGTTGCTACTTGAAATTGTTAGTGGAAGAAGAAGCCTTGGTTGCTATGGTGCTGATCGCCCATTAAATTTGATAGGACATACATGGGAGTTATGGAAAGATGGTGCATCTTCAGAGTTAGTGGATCCATCAATAAACGAGTCATTTGATTCTGATGAAGTACAAAGATGCATTCATATTGGTCTCTTGTGTGTACAACATTATGCAGATGATCGACCAACCATGTCTAACATCGTATCAATGTTGACAAACAAAAGTGAAATAGTTCCCTTACCTGAAAGACCAGCATTCTACGTTGGAAGAAAGATCATTCATGATGAATTATCTTCAAAGGGGTTTTGTACTGAGTCTACAATAGAAATTACAACATCTACAATCGATATGACTGATTCCTAA 2424 0.3816 MTLFHMFLLFPCLKHAMRHKLQKVLAFMCLCLWWSTCIHVEAANDSLKPGDTLNLDTGPVYSKKGNYYLCFGWLDVGYNQYLFLSDINNNYVVWMSDRNQPVAGDSAVLSLNLSGVLKIEYQRGKPTILYSPPQPINNTKATLLDTGNFVLQQLHPNGTNTLLWQTFDYPMDTLIPTMKLGVNHKTGHHWLLVSSLTKTLVNSGAFSLEWEPVGQELIIRRRGKVCWKSGKLRNNRFENIPEDAQGVLKYSIVSNGDEETFSFTSTNENITHFWSLSDTGRLYYNDKEGYVATADLCYGYNTDGGCQRWQDIPKCRNPGDVFQKKTGYISYQNVSLEGNISYGFSDCKASCWSNCHCSAFRKMYSNGTGCIFFHRISAENYTFDSAGENFYLLENMLTNHKGTKKWIWIGAVAATALLAIFLFTICLAFKKRKFVFQGKKRQRMVMKMLHLATCSRSSAMKDFEVDLKKGNGLKLFNYTSIMAATNEFSTENKLGQGGFGPVYKGILPTGQEIAVKRLSKTSGQGIVEFKNELTLICELQHMNLVQLLGCCIDEEERILIYEYLPNKSLDFYLFDCTRGKLLDWKKRFKIIEGISQGLLYLHKYSRLKIIHRDLKASNILLDENMSPKISDFGMARIFTQESVANTNRIVGTHGYMSPEYMMEGVFSPKSDVYSFGVLLLEIVSGRRSLGCYGADRPLNLIGHTWELWKDGASSELVDPSINESFDSDEVQRCIHIGLLCVQHYADDRPTMSNIVSMLTNKSEIVPLPERPAFYVGRKIIHDELSSKGFCTESTIEITTSTIDMTDS* 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1816 807 SMART serkin_6 488 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1816 807 ProSitePatterns Serine/Threonine protein kinases active-site signature. 609 621 IPR008271 GO:0004672|GO:0006468
Pvu11g1816 807 ProSiteProfiles Bulb-type lectin domain profile. 44 164 IPR001480 -
Pvu11g1816 807 SUPERFAMILY Protein kinase-like (PK-like) 473 781 IPR011009 -
Pvu11g1816 807 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 23 796 - -
Pvu11g1816 807 SUPERFAMILY alpha-D-mannose-specific plant lectins 89 195 IPR036426 -
Pvu11g1816 807 ProSiteProfiles Protein kinase domain profile. 488 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1816 807 Gene3D - 42 168 IPR036426 -
Pvu11g1816 807 Pfam Protein tyrosine and serine/threonine kinase 490 758 IPR001245 GO:0004672|GO:0006468
Pvu11g1816 807 Pfam D-mannose binding lectin 92 194 IPR001480 -
Pvu11g1816 807 PIRSF SRK 15 299 IPR024171 GO:0004674
Pvu11g1816 807 PIRSF SRK 292 807 IPR024171 GO:0004674
Pvu11g1816 807 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 23 796 - -
Pvu11g1816 807 Pfam PAN-like domain 342 374 IPR003609 -
Pvu11g1816 807 SMART blect_4 50 170 IPR001480 -
Pvu11g1816 807 CDD STKc_IRAK 494 760 - -
Pvu11g1816 807 Gene3D Transferase(Phosphotransferase) domain 1 564 765 - -
Pvu11g1816 807 Gene3D Phosphorylase Kinase; domain 1 448 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1816 Pvu-Chr11 44947872 44951288 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1816 466 801 Receptor kinase-like Gene Family AT3G45860 55.043 5.30e-124 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu11g1816 PK_Tyr_Ser-Thr 2.6e-46 CL0016