Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1804 ATGGCAGCAGAAATGGTTACTGGTGCTCTTGTTTCTACTTTCGTAGAGAGGACTATTGACACTTTGGCTTCCCGTTTTGTCGACATATTTCGTGCAAGAAAACACAAAAAGAAGCAACTCAGCGACTTGAAGATGAAGCTCCTGGCCATTGATGTTGTGGCTTTTGATGCAGAACAAAAGCAGTTCAAAGATCAAAGTGTGAGAGATTGGCTTCTCAGGGCCAAAGATGTTGTGTTTGATGCAGAAGATCTCTTGGATGAAATAGATTATGAACTCTCCAAAAGCAAAGTGGAAGCTGAGTCTCAGAGTGCTACTTACAAGGTGTGGAATTCTCTCAAATCTTCTTTTGTCACTTTCTTTGAAAATCAAATTGAATCTAGGATGGAACAAGTCATTGAAGACCTAGAAGATCTTGCGACCCGAAGCGATATTCTAGGTTTGAAAAAGGCTAGTGGTGTTGGGGTTGGATCAGGATCGAGAAGTAAATTAACATATACATCTTTGCCAAATGAAAGTGTTATTTATGGCAGAGATGAAGACAAAGAATTTGTCCTTAACTGGCTCACATCTGACACTCACAACAACCTTTCTATACTTTCTATTGTGGGCATGGGTGGGTTGGGTAAGACCTCACTTGCCCAACATGTATTCGATGACCCAAGGATTGAAGGTAAATTTGATATTAAAGCTTGGGTTAGTGTTCCACAGGAATTTGATGTTCTCAATGTATCAAGAGCAATTCTTGACACGATTACTGGTTCAACTGATCATAGTATACAACAGGAAATGGTTCAGAGAAGACTGAAAGAAAATTTGAGGGGGAAGAAATTTCTTCTCATTTTGGATGACGTTTGGAACGAACGACAATCTAAATGGGAAGATGTGCAGAAGCCCCTACTTTTCGGAGGCCAAGGCAGTAGGATTCTTCTCACTACACGTAGTGAGAAGGTTTCTGTTACCATGAGATCAGAAAAGCAATTCCTTCAGGTATTAAGCAAAGATTATTGCTGGGACTTGTTCGCAAAACATGCATTCCAAAGTGCTAATCCTCAACCACATCCAGACTTCTTGGAGATTGGTAAGAAGATAGTTGAAAAATGTAATGGGCTTCCTTTAGCCTTGAAAACAATGGGAAGTCTATTACACAATAAATCATCCTTTTGGGAATGGGAAAGCATTATGAAAAGTGAGATATGGGATTTTTCAGAAGACGAAAGTGATATACTCCCTGCTTTAAGATTGAGTTATCTCCACCTTCCTTCTCATCTGAAGAAATGTTATAGGTTTGACAAGGAGTGTTTAGTTCAACTGTGGTTGGCTGAAAATTTTCTAAAAAGCCCTCTACAGAGAAGGAGTCCTACAGAAGTTGGAGAACAGTATTTCAACGATCTGTTATCGTGGTCCTTCTTTCAACAATCTGGAAAAGAAGAGAAAAAGCATTTTATCATGCATGACCTTCTAAATGATTTGGCGAAATTCGTTTGTGAGGACATCTGCATCAGGTTAGGAGTTGATGAACCAAAAGGTATACCCAAGACAAGCCGTCATTTTTTATTTCCAGGAACTGATGATTTACATTTTGATGAGTTTGGGAGTTTGATTGATACTCAAAAGTTGCATACATTTCTGAAAACTGATTGGCAAACGTATGAAGCTTTTGGTTCCCCTCAGTGCTCTGGGATGTCGATAGATGACTTGTTCTCCAAATTTAAGTTCATACGCGTCTTGTCTTTGTCTCATTGTCGTAACCTTACAGAGGTGCCTAAATCTGTAGGAAATCTTAAGCATCTCCGTTCATTAGATCTCTCTTTTACTGAGATAGAAAAACTACCTGACTCCATAAGTTTACTCTACAAGTTGCAAATACTGAAGCTGAACCATTGTCAAAGATTGAAGGAGCTTCCCTCATGTTTGCATCAACTGGACAATTTGCGATGCCTTGAATTTATAAATACTGAAGTGAACATTGTGCCTGCACATTTGGGAAAGCTGAAGAATCTCCAAGTATTGATGAGTTCGTTTTACGTTGAGAAAAGTAAGGAATTCAGTATTCAGCAATTAGGAGAACTCAATCTTCATGGAACATTAGAAGCAGATTTGAAGAACAAACCACACCTTGTGATGCTAAAGTTAGAATGGAATATTATGGGCAGCTCCTCTATTGATTCAACCAAAGCTGGGGATGTAATTGAGAATCTACGACCTTCAAAACACTTGAAGAAGTTATCAGTAAGGAACTATGTTGGTAAACAACTTCCAAATTGGTTACTCGATAATTTGTTACTGAATCTGGTGTCCTTAGCGTTGATGAATTGTATATGTTGCCAACGTTTACCTCCGCTTGGTCTTTTGCCATCTCTGAAGGAGCTGAAGATTTCAGGGTTTGATGAGATAGTGAGAATTGATGCTGATTTTCATGGGAACAACTCTTGTTCATTTAAATCCCTTTGCCATAAATTAGAGTCTTTGCCTACAAACATGCATATGCTGCTTCCATCTCTCAGGAGGTTATGGATAGAAGACTGTCAAAGACTTGTGTCATTCCCCGAAGGAGGTGTGCCATCAAATCTAAAAGAGCTGAAAATCACTAAGTGCTCTAGACTTGTTGGGTCACTGAGAGGAGCTTTCGGAGACAGTTCTTCTTTGAAAAGGTTGAGGATTGAAAAAATGGATGCAGAATGTTTTCCTGATGAAGGTTTGCTTCCACTCTCTCTTACTTCTCTAGGCATCAATCTTTGTCAAAATCTAAAACAACTGGGCTACAAGGGTTTCTATCAACTCTCATCCCTTCAATCACTCGCAGTTTCGAACTGCCCCAACCTCCAACGCTCACCAGAGGAGGGTCTTCTCAAATCAATTTCTGATCTTCAAATAATCAAT 2880 0.3934 MAAEMVTGALVSTFVERTIDTLASRFVDIFRARKHKKKQLSDLKMKLLAIDVVAFDAEQKQFKDQSVRDWLLRAKDVVFDAEDLLDEIDYELSKSKVEAESQSATYKVWNSLKSSFVTFFENQIESRMEQVIEDLEDLATRSDILGLKKASGVGVGSGSRSKLTYTSLPNESVIYGRDEDKEFVLNWLTSDTHNNLSILSIVGMGGLGKTSLAQHVFDDPRIEGKFDIKAWVSVPQEFDVLNVSRAILDTITGSTDHSIQQEMVQRRLKENLRGKKFLLILDDVWNERQSKWEDVQKPLLFGGQGSRILLTTRSEKVSVTMRSEKQFLQVLSKDYCWDLFAKHAFQSANPQPHPDFLEIGKKIVEKCNGLPLALKTMGSLLHNKSSFWEWESIMKSEIWDFSEDESDILPALRLSYLHLPSHLKKCYRFDKECLVQLWLAENFLKSPLQRRSPTEVGEQYFNDLLSWSFFQQSGKEEKKHFIMHDLLNDLAKFVCEDICIRLGVDEPKGIPKTSRHFLFPGTDDLHFDEFGSLIDTQKLHTFLKTDWQTYEAFGSPQCSGMSIDDLFSKFKFIRVLSLSHCRNLTEVPKSVGNLKHLRSLDLSFTEIEKLPDSISLLYKLQILKLNHCQRLKELPSCLHQLDNLRCLEFINTEVNIVPAHLGKLKNLQVLMSSFYVEKSKEFSIQQLGELNLHGTLEADLKNKPHLVMLKLEWNIMGSSSIDSTKAGDVIENLRPSKHLKKLSVRNYVGKQLPNWLLDNLLLNLVSLALMNCICCQRLPPLGLLPSLKELKISGFDEIVRIDADFHGNNSCSFKSLCHKLESLPTNMHMLLPSLRRLWIEDCQRLVSFPEGGVPSNLKELKITKCSRLVGSLRGAFGDSSSLKRLRIEKMDAECFPDEGLLPLSLTSLGINLCQNLKQLGYKGFYQLSSLQSLAVSNCPNLQRSPEEGLLKSISDLQIIN 960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1804 960 Gene3D - 15 139 - -
Pvu11g1804 960 Pfam Rx N-terminal domain 12 102 IPR041118 -
Pvu11g1804 960 Gene3D Ribonuclease Inhibitor 852 960 IPR032675 -
Pvu11g1804 960 PANTHER OS05G0414200 PROTEIN 21 943 - -
Pvu11g1804 960 Gene3D Ribonuclease Inhibitor 538 851 IPR032675 -
Pvu11g1804 960 SUPERFAMILY L domain-like 552 958 - -
Pvu11g1804 960 Gene3D - 415 493 IPR036388 -
Pvu11g1804 960 Pfam NB-ARC domain 178 395 IPR002182 GO:0043531
Pvu11g1804 960 PANTHER DISEASE RESISTANCE PROTEIN RP 21 943 IPR044974 GO:0006952
Pvu11g1804 960 PRINTS Disease resistance protein signature 198 213 - -
Pvu11g1804 960 PRINTS Disease resistance protein signature 271 285 - -
Pvu11g1804 960 PRINTS Disease resistance protein signature 367 381 - -
Pvu11g1804 960 PRINTS Disease resistance protein signature 568 584 - -
Pvu11g1804 960 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 428 IPR027417 -
Pvu11g1804 960 Gene3D - 158 330 IPR027417 -
Pvu11g1804 960 Coils Coil 121 141 - -
Pvu11g1804 960 CDD AAA 175 331 - -
Pvu11g1804 960 Gene3D - 331 414 IPR042197 -
Pvu11g1804 960 ProSiteProfiles Leucine-rich repeat profile. 596 617 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1804 Pvu-Chr11 44747462 44750579 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1804 562 670 Receptor kinase-like Gene Family AT4G13920 33.929 1.80e-08 56.6