Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1801 ATGAACAGTGATTCAGTGGGAAGTGAAGGGTACTCTCTGCTGAAGGATTTGAGACTAGAAATTGAAGCAAAGGACGCAACTTTCTCTCTCTGCTTTTGGCTTTATTTCACCAGTTTTTCTACATTCCCCGTTACCATTATTCAACAGGTTTACTCTGATATCTCGGAAAGTGCTCCATTTCTTGTTATTGATGATAATAAGAGAATCCATTTGTTACCACTTCTTCTCTTACACGAAGAAGCTCCTGATACTGGCAATATAAATTCCTGGGCAGAAGTTCCACATGCAACTGTTGATTTTAAGTTCCCTTTGGAAAAATGGGTTCATGTTGAATGTCAGGTTTTTCCAGATTATATCCAGCTTCGGATTAATGGAGAGATTATAGGAGAAAAGTCTTTGTGTTCCTTGTTAAATGAGAAATCTGGTTCAAGTGATTTGAAGAAACTGACGTTGGCAAATGTTGGTGGAGATGGAAATAGTGTACAGGGTTATGTGCACAAGTTTGAAATATTTCCTAATATTTCCTCTACTAAGGATTACCATTTAAAGGACCCGCCTTTGAAGTTATCAATTGATGAATCATCTGTCTCTGAGATTGAAGAAGAAAGTGATGGTGTTTGGGCTGTTGTTGGTGGCAAGGCATCTTGTCGTAGGAACTTCTCTTTGGATGTTGTTCTATCAGATGCTTTTGGACAGCCTGTAGATAAGGATAATGAGGTTTTTGCTTCACTTTTGTATGCTGATACCAGAGCACCAGTGGAGAATACAACTGATGATGAAGCACCCCTTTTAGCTAGTTATGATGGAATTGAATTTTCTTCTTGTGAAAGACCAAGTAAGCTTTTGCTGGGTCGTGCTTCATTTAAGCTCAAAATATCTCAGCTTTCATCCAAGTGTGATAACAGGTTCTTCCTCATCAGATTTTGTGTCCCAAAATTAGGAAATTATCCTTTTCTTGAGACATACTCCCATCCAATTCGATGCATCTCCAGAAGCCGTAACACAAGATTGTCCACTCTGGTGTGGAAGAGGTCAACTGCTCATAATTGCTCTAGTGTATCTCAATCTTCAGCTTTGGATGATGGGTCCTTGGAACTTCAGCATTCAGGTCATGACGCACAAGCCAATCCACTAATGAAGCGGTTTAGATTTGGTCAAGACAAGATATCTGTATCAGTGAAGACTGACCCCACCACCTTAGAACAACCTGACGAAGAATGTAACTCTCATGTCCAGACTGCTAACCAGGTAGAGAATGAATTTCCAAGAAGCTCCGATGGAAAGCCTGCAAACGTCAATGAAGCATATGATTCTCCATCTGATTCAGAGAGTATAGGGGAGGGAAATTCACCTTTAAATAGTATGGCAAGTAAAAGATATCCAATATCTGATATGACCATTTTCAAATACAGCCTTGCGAGCTTGGCTGAGAGATCTCTCATACTTAAGGAAATTGCCACCTCTGCTTCTGACAAAGAAATTTTAGAATTGGCTAATCATGTGTCACACTATTCAGGATGTTCGCATCACGGAAACCAAATATTAATTGCCAAGAAATTGATAAAAGATGGAACTAATCTATGGAAGGTGATGTCACCAAACAATCATCACATTCCTTGGGAGAATGCAGTGTATGAGATTCAAGAGCAATTCATGAAGATTGCTTGTTGCGGTTCAAGGTCTCTCTCACCTCAGGACATAAATCTTCTGAGAAGGTTCACTGGATGTCAAGAGTACCTAACACAAGATAACTTCGAGAAGTTGTGGTGTTGGTTGTACCCTGTGGCATTTACAATATCAAGGGACTGGATAAATCCTATCTGGAATTCCACATCACCTAAGTGGATAGAAGGGTTCATAACCAAGGAGGAAGCAGAAGCTTCACTACAAGGTCCCACAGGATTTCAAGAACCTGGTACCTTTGTACTCCGATTTCCTACCTCACGAAGCTGGCCACACCCAGATGCAGGTAGCTTAGTTGTAACCTATGTTGGCAATGACTACAAACTTCACCACAGGCTACTTTCTTTGCATCAGATTTATGGCTCTGGTGATAAACGAGTTGACATGAAACCGCTTCAAGATATGCTATTGGCAGAACCTGAGCTCTCTCGATTGGGAAGGATAATAAGAAGTCATTAG 2142 0.4048 MNSDSVGSEGYSLLKDLRLEIEAKDATFSLCFWLYFTSFSTFPVTIIQQVYSDISESAPFLVIDDNKRIHLLPLLLLHEEAPDTGNINSWAEVPHATVDFKFPLEKWVHVECQVFPDYIQLRINGEIIGEKSLCSLLNEKSGSSDLKKLTLANVGGDGNSVQGYVHKFEIFPNISSTKDYHLKDPPLKLSIDESSVSEIEEESDGVWAVVGGKASCRRNFSLDVVLSDAFGQPVDKDNEVFASLLYADTRAPVENTTDDEAPLLASYDGIEFSSCERPSKLLLGRASFKLKISQLSSKCDNRFFLIRFCVPKLGNYPFLETYSHPIRCISRSRNTRLSTLVWKRSTAHNCSSVSQSSALDDGSLELQHSGHDAQANPLMKRFRFGQDKISVSVKTDPTTLEQPDEECNSHVQTANQVENEFPRSSDGKPANVNEAYDSPSDSESIGEGNSPLNSMASKRYPISDMTIFKYSLASLAERSLILKEIATSASDKEILELANHVSHYSGCSHHGNQILIAKKLIKDGTNLWKVMSPNNHHIPWENAVYEIQEQFMKIACCGSRSLSPQDINLLRRFTGCQEYLTQDNFEKLWCWLYPVAFTISRDWINPIWNSTSPKWIEGFITKEEAEASLQGPTGFQEPGTFVLRFPTSRSWPHPDAGSLVVTYVGNDYKLHHRLLSLHQIYGSGDKRVDMKPLQDMLLAEPELSRLGRIIRSH* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1801 713 PANTHER SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION 8 710 IPR001217 GO:0003700|GO:0006355|GO:0007165
Pvu11g1801 713 CDD SH2_SHA 604 713 - -
Pvu11g1801 713 MobiDBLite consensus disorder prediction 435 454 - -
Pvu11g1801 713 MobiDBLite consensus disorder prediction 417 454 - -
Pvu11g1801 713 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 172 IPR013320 -
Pvu11g1801 713 PANTHER SIGNAL TRANSDUCER AND TRANSCRIPTION ACTIVATOR 8 710 - -
Pvu11g1801 713 ProSiteProfiles Src homology 2 (SH2) domain profile. 615 713 IPR000980 -
Pvu11g1801 713 Gene3D SH2 domain 601 710 IPR036860 -
Pvu11g1801 713 SUPERFAMILY SH2 domain 609 703 IPR036860 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF STAT Pvu11g1801 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1801 11 44718440 44729883 Pvu11g1801 11 44718440 44729883 ECH