Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1800 ATGGAAGAGGAGATTGTTAATCAGCCATTGTTGGAGAAGAAGAAGTACTTCGAGAACTGCCCTGGTTGTAAAGTGGATAAAGCCAACGAGTTGAGTGAGGGACAAGGTGTACCCTTCACAAAGCTTTTCATCGTGTGGATGCTCGTGCTTTGTACTGCATTGCCAATATCATCTCTCTTTCCATTCCTTTATTTCATGGTAAGGGATTTTAAGATTGCGAAAACAGAAGCTGATATCAGTTCTTATGCTGGTTACGTGGGTTCTGCATTTATGTTTGGCAGATGTTTGACATCTTTATTTTGGGGAACTATAGCTGATCGCATTGGTCGAAAACCTGTTATAATTATAGCAATTATTTCAGTCATCATTTTCAACACACTATTTGGCCTCAGCACAAGTTTTTGGATGGCTGTTATCGTGAGGTTTCTTCTGGGAACTTTCAACTGTTTGCTTGGACCAGTGAGGGCCTATGCCTCTGAACTTTTTCGAGAAGAACACCAAGCTCTTGGACTCTCAACCGTGAGTGCAGCTTGGGGCATAGGTTTAATAATTGGTCCAGCATTGGGAGGGTATTTGTCTCAGCCAGTAGAAAAGTACCCTCATATATTTCCAAAGGATTGCTTTTGGGATAAGTTTCCATACTTCCTACCCAACTTTGTTATATCAGCACTTGCATTTGTAGTAGCAATTGGCTGCATCTGGATTCCAGAAACACTTCACAACCACAATTACAGTGATGAATCCATAGAAGATGCAAAAGCTTTAGAAAATGGAAACAATGGGACTGACAATGAAAATATCCAAAAAAATGAAAACCTCTTCCTTAATTGGCCCTTAATGTCATCTATCATTGCATATTGCATTTTCTCACTTCATGATATTACTTATCTAGAGGTTTTCTCCTTATGGGCTGTTTCTCCTCAAAGGTTTGGGGGTTTAAACTTTACAACTGATAATGTTGGTAATGTTCTTTCAATATCAGGTTTTGCACTTATCATTTACCAACTTACCATATATCCATATGTGGAAAAAGCTAGTGGACCTATTTCACTTGGCCGAATCTCATCTATTTTATCCATACCTATTTTGCAAAGCTACCCCTTCATACCATTGTTGTCAGGCGTAGCACTATACATAGTGTTAAGTATTTGTTCAATTCTAAAGAATATTTTTTCTATCACCATTGTAACTGGTTTGCTCCTTCTACAAAACCGAGCAGTGGAACAACACCAAAGGGGTGCTGCTAATGGAATTTCTATGACAGGCATGTCTCTATTAAATGCTATTGGCCCTGCTACAGGTGGTGCAGTATTAACTTGGTCACAAAAGAGGATGGATGCTTCATTCCTCCCAGGCACACATATGGTGTTCTTTGTCCTGAACTTAGTTCAAGCACTTGGGTTACTCATGATGTTCAAACCATTCCTTGTTGTAAAAAAGAAAATGAACACAGATCAGTTACACTGA 1467 0.392 MEEEIVNQPLLEKKKYFENCPGCKVDKANELSEGQGVPFTKLFIVWMLVLCTALPISSLFPFLYFMVRDFKIAKTEADISSYAGYVGSAFMFGRCLTSLFWGTIADRIGRKPVIIIAIISVIIFNTLFGLSTSFWMAVIVRFLLGTFNCLLGPVRAYASELFREEHQALGLSTVSAAWGIGLIIGPALGGYLSQPVEKYPHIFPKDCFWDKFPYFLPNFVISALAFVVAIGCIWIPETLHNHNYSDESIEDAKALENGNNGTDNENIQKNENLFLNWPLMSSIIAYCIFSLHDITYLEVFSLWAVSPQRFGGLNFTTDNVGNVLSISGFALIIYQLTIYPYVEKASGPISLGRISSILSIPILQSYPFIPLLSGVALYIVLSICSILKNIFSITIVTGLLLLQNRAVEQHQRGAANGISMTGMSLLNAIGPATGGAVLTWSQKRMDASFLPGTHMVFFVLNLVQALGLLMMFKPFLVVKKKMNTDQLH* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1800 488 SUPERFAMILY MFS general substrate transporter 42 476 IPR036259 -
Pvu11g1800 488 Pfam Major Facilitator Superfamily 45 431 IPR011701 GO:0022857|GO:0055085
Pvu11g1800 488 PANTHER MAJOR FACILITATOR SUPERFAMILY-RELATED 1 486 - -
Pvu11g1800 488 Gene3D MFS general substrate transporter like domains 40 472 IPR036259 -
Pvu11g1800 488 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 1 486 - -
Pvu11g1800 488 CDD MFS_SLC46_TetA_like 45 473 - -
Pvu11g1800 488 PRINTS Tetracycline resistance protein signature 114 138 IPR001958 GO:0022857
Pvu11g1800 488 PRINTS Tetracycline resistance protein signature 171 193 IPR001958 GO:0022857
Pvu11g1800 488 ProSiteProfiles Major facilitator superfamily (MFS) profile. 41 479 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1800 Pvu-Chr11 44662433 44673052 Tandem