Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1787 ATGGAGTGCCTATTGGGTTTTGCATCTTCCGTTTCAAGAGATTTACTTGAAGAAGAAGAGGGTGATTTGATTGTAACGAGAGATAGTGTCCAAAAATTTGTTACAAATGCTAAGAGACAAACAAGAAAGACCAGTGAAGTTGTTGACAAGTGGTTACAAGATGCTATCAATGATGTAGACAATGTGAATCAGTTATTGAAAGAGGCAAAAGCCAAAAAAATCTGCTGCTTTGGGCATTGTCCGAATTGGATTTGGCAATACCGTGTAGGAAAAAAGTTAGCAAATAAAAATGTGTACCTTGAAAAGTTCATCGCAGAGGGTAGAAAATATGTGCCATTTGATCGCATTTCTACACTTCCATCAGACACCCTTCATTTTCTCTCAGAAAAATGCATGACTTTTGAGAGTAGACAATCTGCATATGAGCAACTACTGGAAGCAGTAAAAAATAATAATATTGCCATGATTGGATTGTATGGGATGGGGGGTTGTGGTAAAACCACATTAGCAATGGAGGTTAGGAAGTTAGTAGAAGCAGAACATTGTTTTGAAAAAGTTCTTTTTGTATCTATTTCAAGTACAGTGGAAGTTCGAAGGATCCAAGAAAAAATTGCAAGTTCATTGCAATATACATTTCCAGAAACTGAAGTAATGGAGAGAGCCCAAAGATTGTGCTTGAGATTATGCCAGGAGAAAAAAATTCTTGTGATTCTAGATGATGTGTGGGAGAAACTTGACTTTGGTGGCATTGGGATTCCCTCCTCTGAACACCATAAAGGTTGCAAGATTCTCATTACCACTAGATCGGAAGAAGTTTGTACTTCAATGGATTGTCAAAGAAAGATTTACTTACCAATTTTAACGGATGAAGAAGCATGGAGTCTTTTCCAAAATAAAGCACTTATATCCGAAGGTACCTCTGATGCCTTAAGGCATATGGGAAGATTAATTTCCAAGGAATGTAAAGGATTGCCTGTTGCCATTGCAGCTGTTGCTAGTAGTTTAAAGGGAAAAAATGAGACAATATGGAGTGTTGCATTGAATAAATTGAGAAGTTCCAAGCCAATAAATATTGAAAGAGGTTTGATCGATCCCTACAAGTGCTTGCAGCTGAGCTATGATAATTTGGATACTAAAGAAGCTAAATCACTTTTTCTGTTGTGTTCTGTGTTCCCTGAAGATTTTGTAATTCCAGTAGGACATTTAACAAGATATGCAGTAGGATTAGGTGTAGTTGGAGAAACACACTCATATGAGGAGGCAAAGAGTGAAGTGATTGCAGCCAAAATTAAGCTCGTTAGTTCTTGTTTATTGTTGGATGAAGATAATGAACGTGTCAAAATGCATGATACAGTTCGCGATGTAGCCCACTTGATAGCAAAGAATGAGAATAAGATCATCAAGTGCGAAGTGAAAAAAGATGTGATTGTTGAACAAAATTCAGTAAGATATCTATGGTGTGTGAAATTTCCAAATGATTTGGACTGTTCCAATCTGGAGTTTTTATTCTTACGAACAAAATTGAAAGAATTTGATGGAATTTTCAAAAGAATGGGAATGCTCAAAGTTTTGATTCTTTTCAATGATGAGGATGGAATAACACCACCACTGTCAACAATGTCTTTAAAAACATTAACAAATCTTCGTTGTCTAGCCATTTTCGGTTATGAATTGAGCGACTTCTCATTTATAAGCTATATGAAGAAACTTCAAAGTATTTCGCTATTTAGTTGTTCATTGCCTTCATGTTCTGAATTACAAACCAACGTTGGAATTACACAAGTACCAACCATAAAATTGTTAGAGTTGAACAAATGTGACATTAAGGGGAAGAAGTTTGAAGTAATGAAAAGAACCCCTCTACTCGAAGAGTTGTACATTGTCGATATTGAAGGAGAATGGGATGCTAACAGTAAAGACAATATTGATTTCTTTAACACGTTTAGTGTCCCCCAAACACTTCAAAGTTATGGAATTGTATTAGGATCCCATAATTTTTATGATTATAATGTTAAAGAATTTTGCTCTCATCACAGAACTTTATTACTTAACTATTTTAACATATCAAATGAGGTAGTTAAGAGTTTGGCAAAAAAAGCAAAGGATCTATTTATAGCCAATATTCAAGTAGGCACAAAAAATATCATCCCTGATATATTTCAAATTGAAGGAGGAGGTTTGGATGAATTGAATAACTTTGAGATACGAGATTCTGAAGAGATAGAGTGTTTGATTGACACTAGTAATCATTATAGTGAAGTGGTAACTCTCTTCTCCAAGTTGCATACATTGAGAATCCATAACATGGAAAATCTAAGAGCTTTATGGCATTGTTTTCAACCTACCAATGGGTCTTTTGAGAACTTAGAGAAGTTGTATTTAAGTGATTGTCCAAAGTTGACATCTCTCTTTGCTTATGTTGTGGCTCGACGTTTGGTACAATTGAAAATATTAAAAATAACAAGATGTGATGGACTTGAGCATATATTAGTAGATGATGACAAAAAAGAGAAAAGTCAAGGTGAATTTACCACTCATGTACAAACCTTCCAGAATCTTCAGGAAGTAAAGGTAAATAGTTGTAGAAAATTAAAGCATATATTCTTGGCCAACATTGTAAGAGGTTTAGCTCAATTGAAAGTGCTCGAGATTGAAGAATGTGACATGCTAGATCAAATATTTGGGGATATTGTTCCATTAACACACCATGATCAAAATGAAGAACTTAATGAAATTGTTGAGGAAGATAAGTATCCACATTTGTATAGAACTTCAATTCCATCAACATCTATTGTGAAACATAGCCCAGGAACTCTATCAAGCCTTGCAAGCCTTAGGATAAACAATTGTCCAAAGTTAGGCTCAATTTTTACAGCGTCTACAGCTAAGACCTTGACTTCTTTGGAAGAATTGATCATAGAAGAGTGCAGTAGTTTGAAGCATGTAGTAACTCATGAAAGGGTCAATCAAAATCATAAGGAAAATATTTTCGAGGATGACCATGACTTTCATAGTGATATTTCAATCTTCCAGAGTTTGAAAAAACTACATATCATTGGATGTGACTTATTGCAACGTATATTCTCTGTCTCTTTTGTAGGAGGCATGATGAAAATGAATGATATAAAAAGTGAAGAGGCTGATGATTTGAAATATTTTTCAAGTCGAAATAATTTTGGAGAAACTAATCAGGATTGTGAGGAGATTCATATTCATTTATCAACATTAGAAATATTTTCTCTTCATAATCTACCAAATTTTGTTAGCATTTGTGCTACCAACAATCTCATTGTGACATGGCCATCTTTGAAGGAATTTGAGTGTCATGAATGTTCCTATCCTTTTTATGATTCTATTAGTTGTTTGACAGCTCCTACGGATTCAAGAGGGCTTATTAGTAAGGTATTTTTTTGTCTTAATGGACATGGAATGATTGGGCAACAAATGAGTTTAAGGTTAAAGGATTTGTTGTTGGAAAATCTACCTCAAATGACTTATATTTGGGTGGCTTCCAAGAATTCAGTTAATCTCCAAAATCTCACTACATTAATAATAATGGGATGTGCAAAATTGAAAGTAATCTTTCCTCCCTCTATTTTAAGAAGCTTAACAAAGTTGAAGTGTCTAAGCATAAAAAAATGCATGGAATTGAAGCAGATTGTTGGATGTGAACAAGGAGATCCAAAGAATTATGTTACCTTCTCAAATCTTGAAAGATTAGAAATAATTGGATGTGCAAAATTGGAAAAAATCTTTCCAAAGTATGTTTTAAGATGTCTACCAGAGTTGAATACTGTGAAGATAAGAAAATGCAAGGAATTAAGACAAATCATTGAAGAGGATGTGAAGGATAAAAAATTGTCACAAGCTAAAAAGAGTTATTCTCAACCATGCTTCCCAAAACTAGAAGCATTGTATGTTGAACATTGCCACAGGCTAAAAAGAGTTATCTCTGGATCTACATCTAATGACCTTCCCAATCTTTATCTTTTGATCATAAGTGGAGCCTCTGAACTAGAAGAGCTTGTTGGATGTGAACAAAGACAAGGTGATGAGATAGGAAAGACAAAAGTTGAGCTTCCAAGACTGAAAGTTTTAATATTTATGCATCTCTCAAACTTCAGTCAAGAGATTGAATTGCCCAATTTAAAGAATAGTGTTGTCTACGAATGTCCAAAACTCTCTTTGACTCCAACAACTACTTTTGAGAAGCTCAAGGAAATTTTTCCTTATAAAGATTTAAAAAACACAGGACTTTTTGAGTGGGACATTAGGGACTTGATGGAAGATTTAGATGAAGATTCTAGTATTAGTAGCAGTGATTTCACTTCATCACAGGATATTGGAAACATAGGAAATAAGAGCATTGAAGAGGGGGCTTCAGTTGAGGGTGTTAAGACAAAACATTTGTCAACTAGTGTTGAAGACATTAGCATTGGAAGTGGTGTTGCAACTCACATTGAATCTGGTGGTGTGGACATACTTGCACAACATTCCAAGGTTGTTGAACAAGATGATAAGATGAATGAAGGCAAGGCAAGAATCATGCCAAGCCAAGAAATCCAAGTAGAAGAAGGGTTGAATCTATTGGACAAACAAGAGGATATTCGTACAAGATTGGAAGCATATAGACATTTTGTGGATATGGATGATGCACAAATTGCTCTTCTAGTGGAGGCAATAACAACATATCCTCATCTTTGGAATGCTTGCGAAAAGTTTAGTGAGCGCTTTCAAGCTTGGAGGTTGAAAATTTTAGCAGATATGTTGTTATTCCTTCAGAAGGAAAATGTCGATATTGTTATTCCTCAAAGAGAAAAAGTGTTCCATAAACTATGCGATGAAGCTGTTGAAATTGGATTTGAGATTTCATGGGTAGATGAAATGCGTCAACATGTTTTGACGAGGGATCCTAAGCTGAGAGAAGACATTACAAAGAGACAAATGGATGAGAATCCTAAGAGGTCTAGTAGTATGGACGTCGTAGATTCCCAGCCTATTGAACAAGATGATGGGCTTAATGAAAATTGCAAAAGAACTTTTGTACGTTTGAAGACCCAAAATGTTAATAGTAGCTTCGAAAAAGGTGAAATAAGTGTTGTTTCTAATGACCGCATTGTGGCTACAAGAAATGAAGAACCAGATAGGGAATTTGTTGCAAAAGTTTCCACTTCAGAAATACCAAGAACAACAACATCATTAACAAACTCACAACCAGTTGAAAGTCTAACTCCAAGTTATTTGAATATTCATGTGCGTGAAATACACTCAAATGCATTAAAGGACAAACAGCGGATTAGCGAACCGTGTTTGATGAACCAACAAAAGCCACTTGGAGAAATTGTAAGTAGGCACAAAATTCCTCAGAGTATTGAACAAGTTGTTGTAGAGGAAACCATAGCAAAGAACACCATGGCAGCTTCATCAATTCCTTCTGAATCCGCAGGCCCACAGTTGGACCAAATATTTACTTTCCAAAGTAAATCAAATCCACATAGTGAAATTAGGAATAGCCAAACTAAGACACGCACGGCTAAAACAAGTGAAGGTCATCGTAAAATTAATCAAGACTTTGGGACCAATGATATTTTGAGTTTATTTGCACCTGTTGATGTGGGGAAAGAGGGTGAAGATAACATAGTTGGAAAGACCCTTGTTGAGTTGGAAAAGTATCTAAAGATGTCTTTGAAGGACATAGTTACCTCTGAGACTAACAGCCTTCGCCTTTTGTCTGCTCTTAATTTCTTGTTCAACCTTCCTTTCGAAGATGTAACTCTATCAAATGGACTCAAAGATATTATAGGCACTATGCAACAAGAGTTCCTAAGCATTGTATACTCCTTTAAGCAAGGCTTTGCTACCACTGAGAAGTTGGCAGAACTTGAAGCTCGTGGGAATGATTTGTCCATTACTCTTGTTTCCAAAATTTCTAAGGCAGAGAATTTATACGATGAAGCTCAACTGAAGAAAGTAGTTTTGAAGGAACAAATCAATAGGTTGAAGGAAGAAATAAAACTTTGTGAGGCTGCCTTATCATCTTTGGAGGAGGAAAAAAATAAATGCATTGAGGGAACTGTAGGGTACAAAATGGAGCTTCAAAATGTGAGGAAAGACATGTCTCAAATGGTGGAAGATCAAAGAAAAGTTCAGAAAGAATTGTTTGAGGTGGCTTACAAATGGTCAGTTCTGTGTAGTCAATATGAATACAATCGCATGGCTACTAGAAATCCCTAA 6234 0.355 MECLLGFASSVSRDLLEEEEGDLIVTRDSVQKFVTNAKRQTRKTSEVVDKWLQDAINDVDNVNQLLKEAKAKKICCFGHCPNWIWQYRVGKKLANKNVYLEKFIAEGRKYVPFDRISTLPSDTLHFLSEKCMTFESRQSAYEQLLEAVKNNNIAMIGLYGMGGCGKTTLAMEVRKLVEAEHCFEKVLFVSISSTVEVRRIQEKIASSLQYTFPETEVMERAQRLCLRLCQEKKILVILDDVWEKLDFGGIGIPSSEHHKGCKILITTRSEEVCTSMDCQRKIYLPILTDEEAWSLFQNKALISEGTSDALRHMGRLISKECKGLPVAIAAVASSLKGKNETIWSVALNKLRSSKPINIERGLIDPYKCLQLSYDNLDTKEAKSLFLLCSVFPEDFVIPVGHLTRYAVGLGVVGETHSYEEAKSEVIAAKIKLVSSCLLLDEDNERVKMHDTVRDVAHLIAKNENKIIKCEVKKDVIVEQNSVRYLWCVKFPNDLDCSNLEFLFLRTKLKEFDGIFKRMGMLKVLILFNDEDGITPPLSTMSLKTLTNLRCLAIFGYELSDFSFISYMKKLQSISLFSCSLPSCSELQTNVGITQVPTIKLLELNKCDIKGKKFEVMKRTPLLEELYIVDIEGEWDANSKDNIDFFNTFSVPQTLQSYGIVLGSHNFYDYNVKEFCSHHRTLLLNYFNISNEVVKSLAKKAKDLFIANIQVGTKNIIPDIFQIEGGGLDELNNFEIRDSEEIECLIDTSNHYSEVVTLFSKLHTLRIHNMENLRALWHCFQPTNGSFENLEKLYLSDCPKLTSLFAYVVARRLVQLKILKITRCDGLEHILVDDDKKEKSQGEFTTHVQTFQNLQEVKVNSCRKLKHIFLANIVRGLAQLKVLEIEECDMLDQIFGDIVPLTHHDQNEELNEIVEEDKYPHLYRTSIPSTSIVKHSPGTLSSLASLRINNCPKLGSIFTASTAKTLTSLEELIIEECSSLKHVVTHERVNQNHKENIFEDDHDFHSDISIFQSLKKLHIIGCDLLQRIFSVSFVGGMMKMNDIKSEEADDLKYFSSRNNFGETNQDCEEIHIHLSTLEIFSLHNLPNFVSICATNNLIVTWPSLKEFECHECSYPFYDSISCLTAPTDSRGLISKVFFCLNGHGMIGQQMSLRLKDLLLENLPQMTYIWVASKNSVNLQNLTTLIIMGCAKLKVIFPPSILRSLTKLKCLSIKKCMELKQIVGCEQGDPKNYVTFSNLERLEIIGCAKLEKIFPKYVLRCLPELNTVKIRKCKELRQIIEEDVKDKKLSQAKKSYSQPCFPKLEALYVEHCHRLKRVISGSTSNDLPNLYLLIISGASELEELVGCEQRQGDEIGKTKVELPRLKVLIFMHLSNFSQEIELPNLKNSVVYECPKLSLTPTTTFEKLKEIFPYKDLKNTGLFEWDIRDLMEDLDEDSSISSSDFTSSQDIGNIGNKSIEEGASVEGVKTKHLSTSVEDISIGSGVATHIESGGVDILAQHSKVVEQDDKMNEGKARIMPSQEIQVEEGLNLLDKQEDIRTRLEAYRHFVDMDDAQIALLVEAITTYPHLWNACEKFSERFQAWRLKILADMLLFLQKENVDIVIPQREKVFHKLCDEAVEIGFEISWVDEMRQHVLTRDPKLREDITKRQMDENPKRSSSMDVVDSQPIEQDDGLNENCKRTFVRLKTQNVNSSFEKGEISVVSNDRIVATRNEEPDREFVAKVSTSEIPRTTTSLTNSQPVESLTPSYLNIHVREIHSNALKDKQRISEPCLMNQQKPLGEIVSRHKIPQSIEQVVVEETIAKNTMAASSIPSESAGPQLDQIFTFQSKSNPHSEIRNSQTKTRTAKTSEGHRKINQDFGTNDILSLFAPVDVGKEGEDNIVGKTLVELEKYLKMSLKDIVTSETNSLRLLSALNFLFNLPFEDVTLSNGLKDIIGTMQQEFLSIVYSFKQGFATTEKLAELEARGNDLSITLVSKISKAENLYDEAQLKKVVLKEQINRLKEEIKLCEAALSSLEEEKNKCIEGTVGYKMELQNVRKDMSQMVEDQRKVQKELFEVAYKWSVLCSQYEYNRMATRNP* 2078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1787 2077 Coils Coil 2032 2052 - -
Pvu11g1787 2077 Coils Coil 52 72 - -
Pvu11g1787 2077 PANTHER PHOSPHATASE, PUTATIVE-RELATED 26 833 - -
Pvu11g1787 2077 PANTHER PHOSPHATASE, PUTATIVE-RELATED 843 964 - -
Pvu11g1787 2077 PANTHER PHOSPHATASE, PUTATIVE-RELATED 997 1215 - -
Pvu11g1787 2077 MobiDBLite consensus disorder prediction 1828 1850 - -
Pvu11g1787 2077 SUPERFAMILY L domain-like 754 1029 - -
Pvu11g1787 2077 Gene3D Ribonuclease Inhibitor 477 633 IPR032675 -
Pvu11g1787 2077 SUPERFAMILY L domain-like 480 825 - -
Pvu11g1787 2077 MobiDBLite consensus disorder prediction 1643 1657 - -
Pvu11g1787 2077 SUPERFAMILY RNI-like 1152 1375 - -
Pvu11g1787 2077 Gene3D Ribonuclease Inhibitor 1140 1296 IPR032675 -
Pvu11g1787 2077 Gene3D Ribonuclease Inhibitor 641 839 IPR032675 -
Pvu11g1787 2077 Gene3D Ribonuclease Inhibitor 840 1000 IPR032675 -
Pvu11g1787 2077 Coils Coil 1976 2017 - -
Pvu11g1787 2077 Gene3D - 286 377 IPR042197 -
Pvu11g1787 2077 MobiDBLite consensus disorder prediction 1643 1672 - -
Pvu11g1787 2077 Pfam NB-ARC domain 143 374 IPR002182 GO:0043531
Pvu11g1787 2077 Gene3D - 119 283 IPR027417 -
Pvu11g1787 2077 PANTHER - 997 1215 - -
Pvu11g1787 2077 PANTHER - 26 833 - -
Pvu11g1787 2077 PANTHER - 843 964 - -
Pvu11g1787 2077 MobiDBLite consensus disorder prediction 1828 1844 - -
Pvu11g1787 2077 PRINTS Disease resistance protein signature 155 170 - -
Pvu11g1787 2077 PRINTS Disease resistance protein signature 228 242 - -
Pvu11g1787 2077 PRINTS Disease resistance protein signature 321 335 - -
Pvu11g1787 2077 PRINTS Disease resistance protein signature 874 890 - -
Pvu11g1787 2077 CDD AAA 137 267 - -
Pvu11g1787 2077 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 128 388 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1787 Pvu-Chr11 44402919 44413216 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1787 137 485 WRKY Transcription Factor Family AT5G45050 26.542 1.04e-08 58.9