Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1777 ATGCACCGAAGAATGTTCACCGTTAGTCCTCTACCTCATGCCCCAAACGGTTTCTCGCCGCCGCCGCCGCCAGGAAGTGGTGCAGCAAAGGCCAGTAGCTTCAGTCCGACACTTGCATACATATTTCTCGTTGTATTCATCATCATTTTCTTCTTCATCGGTTTGAAATACTTCTACATGCGACGATCCTCCTCGACGAATTCCCCGCCCGGGCAAGCGGTGTCGAATCCCATGGTTTCGAGACCTCTGATGGTGGTGGCCGTGGTGGCCGAAGCAGCTGGGGAGTGTACTATCTGTCTGGAGGGGGTGGCAGAGGGAGAGGACGTGAAGATGACTGCCCATTGCAGGCACATCTTCCACGCGAACTGCATCGACACTTGGCTGGAGAACCATGTTACGTGCCCGGTGTGCCGATATTCTAAGATGGGTGAAGAGGAGGAGCTTGTGACGGTGGAAGGAGGTGAAGAAGAAGATGTAGAAGTTTCTGGAACAAACTTGGAGTAG 504 0.5337 MHRRMFTVSPLPHAPNGFSPPPPPGSGAAKASSFSPTLAYIFLVVFIIIFFFIGLKYFYMRRSSSTNSPPGQAVSNPMVSRPLMVVAVVAEAAGECTICLEGVAEGEDVKMTAHCRHIFHANCIDTWLENHVTCPVCRYSKMGEEEELVTVEGGEEEDVEVSGTNLE* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1777 167 PANTHER RING FINGER DOMAIN-CONTAINING 8 142 - -
Pvu11g1777 167 CDD RING-H2_EL5_like 95 138 - -
Pvu11g1777 167 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL6 8 142 - -
Pvu11g1777 167 ProSiteProfiles Zinc finger RING-type profile. 96 138 IPR001841 -
Pvu11g1777 167 MobiDBLite consensus disorder prediction 1 26 - -
Pvu11g1777 167 Pfam Ring finger domain 95 138 IPR001841 -
Pvu11g1777 167 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 86 143 IPR013083 -
Pvu11g1777 167 SUPERFAMILY RING/U-box 95 140 - -
Pvu11g1777 167 SMART ring_2 96 137 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1777 Pvu-Chr11 44260088 44260603 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1777 29 164 C3H Transcription Factor Family AT2G27940 28.659 6.64e-19 79.0