Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1775 ATGCAGCGAAGTTTCGTCGTTCCTCCTCTCCCTGGTTTCTCGTCGCCGCCGCTGCCGCCGCCGCCGCCAAGAACTGCAGGAAAGTCCAGTAGCTTCAGTCCAAAACTTGCTTACATACTTCTGGTTGTCTTCATCATCGTCTTCTTCTTCGTCTCTTTTATATACTTCTACATGCGAAGGAGCTCGACGAACCCCGCGACGGTCGGCAACATCCAAGGGCAAGCGCCCGTGGCTTCGAGACCTTTGACTGTGGTGGCTGTGGTGGCCGAAGCAGCTGGGGAGTGCAGTATCTGCCTAGAGGGGGTGGCAGAGGGAGAGGACGTGAAGATGACTGCCCATTGCAGGCACATCTTCCACGCGAACTGCATCGACACTTGGTTGGAGAACCATGTGACGTGCCCGGTGTGCCGATATTCCGAGATGGGTGGAGAGGAGGAGCTTGTGACGGTGGTAGGAGGAGGAGGTGAAGAAGAAGAAGATGCAACAAAGTAG 492 0.5589 MQRSFVVPPLPGFSSPPLPPPPPRTAGKSSSFSPKLAYILLVVFIIVFFFVSFIYFYMRRSSTNPATVGNIQGQAPVASRPLTVVAVVAEAAGECSICLEGVAEGEDVKMTAHCRHIFHANCIDTWLENHVTCPVCRYSEMGGEEELVTVVGGGGEEEEDATK* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1775 163 MobiDBLite consensus disorder prediction 10 26 - -
Pvu11g1775 163 Pfam Ring finger domain 94 137 IPR001841 -
Pvu11g1775 163 MobiDBLite consensus disorder prediction 1 26 - -
Pvu11g1775 163 PANTHER RING FINGER DOMAIN-CONTAINING 18 73 - -
Pvu11g1775 163 PANTHER RING FINGER DOMAIN-CONTAINING 91 141 - -
Pvu11g1775 163 SUPERFAMILY RING/U-box 88 139 - -
Pvu11g1775 163 CDD RING-H2_EL5_like 94 137 - -
Pvu11g1775 163 SMART ring_2 95 136 IPR001841 -
Pvu11g1775 163 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 85 142 IPR013083 -
Pvu11g1775 163 ProSiteProfiles Zinc finger RING-type profile. 95 137 IPR001841 -
Pvu11g1775 163 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL6 18 73 - -
Pvu11g1775 163 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL6 91 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1775 Pvu-Chr11 44230014 44230505 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1775 10 158 Rapid Response to Elicitors AT3G05200 32.353 3.74e-18 78.6