Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1772 CGAATAATCTTCGCCGTTCCTCCTCTCCCTGGTTTCTCGCTGCCGCCGCCGTTGCCAAGAACTGCAGGAAACTCCGGTGGCTTCAGTTCGACAATTGCTTACATACTTCTCGTTGTCTTCATCATCATCTTCTTCTTCGTCAGTTTGATATACTTCTACATGCGAAGGCGCTCGACGAACCCCGCGACGGCCGGCAACATCCAAGGGCAAGCGCCCGTGGCTTTGAGACCTCTGACGGTGGTGGCCGTGGTGGCCGAAGCAGCTGGGGAATGTAGTATCTGCCTGGAGGGGGTGGCAGAGGGAGAGGGCGTGAAGATGAATGCCCACTGTCAGCACATCTTCCACACCAACTACATCGACACTTGGCTGGAGAACCATGGTAGGTGCCCGGTGTGTTGA 399 0.5614 RIIFAVPPLPGFSLPPPLPRTAGNSGGFSSTIAYILLVVFIIIFFFVSLIYFYMRRRSTNPATAGNIQGQAPVALRPLTVVAVVAEAAGECSICLEGVAEGEGVKMNAHCQHIFHTNYIDTWLENHGRCPVC* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1772 132 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RING1-RELATED 36 132 - -
Pvu11g1772 132 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 56 132 IPR013083 -
Pvu11g1772 132 Pfam Ring finger domain 90 132 IPR001841 -
Pvu11g1772 132 ProSiteProfiles Zinc finger RING-type profile. 91 132 IPR001841 -
Pvu11g1772 132 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 36 132 IPR044675 -
Pvu11g1772 132 SUPERFAMILY RING/U-box 90 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1772 Pvu-Chr11 44183335 44183733 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1772 19 132 C3H Transcription Factor Family AT5G42200 29.104 9.95e-13 59.7