Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1769 ATGGAAGAACAACGGAAAATCAGAGCAACCGGAGAAACAACCATGCAGCGAAGCTTCGTCGTTCCTCCTCTCCCTGGTTTCTTGGCGCCGCCGCCAAGAACTGCAGGAAAGTCCAGTAGCTTCAGTCCAAAACTTGCTTACATACTTCTGATTGTCTTCATCATCGTCGTCTTCTTGGTCTCTTTTATATACTTCTACATGCGAAGGAGCTCGACGAACCCCGCGGCGGTCGGCAACATCCAAGGCCAAGCGCCCGTGACTTCGAGACGTATAACTGTGGTGGTCGTGGTGACCGAAGCAGCTGGGGAGTCCAGTATCTGCCTGGAGGGGGTGGCAGAGGGAGAAGACGTAAAGATGACTGCGCATTGCAGGCACATCTTCCACGCGAACTGCATCGCCACTTGGTTGGAGAACCATGTGACGTGCCCGGTGTGCCGATATTCTGAAATGGGTGGAGAGAAGGAGGTGAAGAAGAAGAAGATGCAACAGAGTAGTAGGGAGTGA 504 0.5298 MEEQRKIRATGETTMQRSFVVPPLPGFLAPPPRTAGKSSSFSPKLAYILLIVFIIVVFLVSFIYFYMRRSSTNPAAVGNIQGQAPVTSRRITVVVVVTEAAGESSICLEGVAEGEDVKMTAHCRHIFHANCIATWLENHVTCPVCRYSEMGGEKEVKKKKMQQSSRE* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1769 167 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 45 151 IPR044675 -
Pvu11g1769 167 CDD RING-H2_EL5_like 103 146 - -
Pvu11g1769 167 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 93 151 IPR013083 -
Pvu11g1769 167 SUPERFAMILY RING/U-box 105 148 - -
Pvu11g1769 167 ProSiteProfiles Zinc finger RING-type profile. 106 146 IPR001841 -
Pvu11g1769 167 PANTHER RING-H2 FINGER PROTEIN ATL2 45 151 - -
Pvu11g1769 167 SMART ring_2 104 145 IPR001841 -
Pvu11g1769 167 Pfam Ring finger domain 105 146 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1769 Pvu-Chr11 44172817 44173320 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1769 41 146 Rapid Response to Elicitors AT3G05200 32.283 3.27e-15 70.1