Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1761 ATGGATTTGATGTTCCCTCTGAAACCCCATAGTGTTATTCTCAAGGCACCACTCTTTTCTTCTCTGTTGTTCCCTCTTCCTCTAAGGTTTCGTGCTGTCACCGCTTTCAAGCATGCAAATATTCAATGCGAACTTGAAGGCCGACCCAATGGTGCTCTCTCCGGTGACTTCGACCCTCGCTTCATTGATAGGCAAAAAGCACTGGAAGCAGCAATGAATGATATAAACAGCTCCTTTGGAAAGGGAAGTGTTACAAGACTGGGCAGTGCTGGTGGAGCTTTAGTTGAAACTTTCCCCAGTGGTTGTTTGACCTTGGACTGTGCTTTAGGTGGTGGTCTTCCTAAAGGAAGAATTGTAGAGATATTTGGACCAGAAAGTAGTGGGAAAACCACCCTAGCTCTTCATGCTATTGCAGAAGTGCAGAAGTTAGGAGGCAATGCAATGCTTGTTGATGCAGAGCATGCTTTTGATCCTGCATATTCTAAAGCATTAGGAGTGGATGTAGAAAATTTAATTGTATGCCAACCTGATCATGGCGAGATGGCTCTTGAGATTGCAGACCGAATGTGTAGATCTGGAGCCATAGATCTCATTTGTGTGGATTCTGTCTCAGCTCTCACTCCACGAGCTGAAATTGAAGGGGAGATTGGAATGCAACAAATTGGATTACAAGCTCGTCTTATGAGCCAAGCTTTGCGTAAAATGTCTGGGAATGCATCTAAAGCTGGTTGCACTCTTATATTTTTGAATCAAATAAGATATAAGATTGGTGTCTATTATGGAAATCCAGAAGTGACCAGTGGTGGGATTGCATTGAAGTTCTTTGCGTCACTTCGGCTAGAAGTTCGTCCTGCAGGGAAGATAAAGTCTGCTAAAGGAGATGAAGAAATTGGCCTTAAAGTTCGTTTAAGAGTACAAAAGAGCAAGGTATCAAGGCCTTACAAACTAGCTGAATTTGAAATTATATTTGGAGAGGGAATCAGTAAGCTGGGATGCATTTTAGATTGTGCAGAAATGACGGATATTGTTTTAAAGAAGGGCTCTTGGTACAGCTATGGAGACCATCGGTTGGGACAGGGAAGGGACAAAGCAATACAGTACTTAAAGGAGAATACGAATCTTTTAGAAGAAATTGAAAAGGTAGTTAGGTCTTCATTGGTTGATGGAAGTAACCAAGCAAGCCTTGCACACATGAAGAATAGTCCAGTGCTACATGAAGATGATGATATATTTGAGGAAAGTCAGTGA 1248 0.4215 MDLMFPLKPHSVILKAPLFSSLLFPLPLRFRAVTAFKHANIQCELEGRPNGALSGDFDPRFIDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQPDHGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEVRPAGKIKSAKGDEEIGLKVRLRVQKSKVSRPYKLAEFEIIFGEGISKLGCILDCAEMTDIVLKKGSWYSYGDHRLGQGRDKAIQYLKENTNLLEEIEKVVRSSLVDGSNQASLAHMKNSPVLHEDDDIFEESQ* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1761 415 SUPERFAMILY RecA protein, C-terminal domain 328 384 IPR023400 -
Pvu11g1761 415 ProSitePatterns recA signature. 271 279 IPR020584 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Pvu11g1761 415 CDD recA 63 386 IPR013765 GO:0003697|GO:0005524|GO:0006281
Pvu11g1761 415 PANTHER RECA 60 401 IPR013765 GO:0003697|GO:0005524|GO:0006281
Pvu11g1761 415 Pfam recA bacterial DNA recombination protein 66 328 IPR013765 GO:0003697|GO:0005524|GO:0006281
Pvu11g1761 415 Gene3D - 328 403 - -
Pvu11g1761 415 TIGRFAM tigrfam_recA: protein RecA 63 383 IPR013765 GO:0003697|GO:0005524|GO:0006281
Pvu11g1761 415 PANTHER MITOCHONDRIAL DNA REPAIR PROTEIN RECA HOMOLOG 60 401 - -
Pvu11g1761 415 ProSiteProfiles RecA family profile 1. 94 252 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Pvu11g1761 415 PRINTS RecA protein signature 151 180 IPR013765 GO:0003697|GO:0005524|GO:0006281
Pvu11g1761 415 PRINTS RecA protein signature 185 214 IPR013765 GO:0003697|GO:0005524|GO:0006281
Pvu11g1761 415 PRINTS RecA protein signature 223 252 IPR013765 GO:0003697|GO:0005524|GO:0006281
Pvu11g1761 415 PRINTS RecA protein signature 268 296 IPR013765 GO:0003697|GO:0005524|GO:0006281
Pvu11g1761 415 PRINTS RecA protein signature 303 332 IPR013765 GO:0003697|GO:0005524|GO:0006281
Pvu11g1761 415 PRINTS RecA protein signature 357 374 IPR013765 GO:0003697|GO:0005524|GO:0006281
Pvu11g1761 415 ProSiteProfiles RecA family profile 2. 257 332 IPR020587 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Pvu11g1761 415 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 64 327 IPR027417 -
Pvu11g1761 415 Hamap Protein RecA [recA]. 64 389 IPR013765 GO:0003697|GO:0005524|GO:0006281
Pvu11g1761 415 Gene3D - 86 327 IPR027417 -
Pvu11g1761 415 SMART AAA_5 115 286 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1761 Pvu-Chr11 44038252 44048824 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1826 6 28644997 28651046 Pvu11g1761 11 44038252 44048824 ECH
Pvu5g0984 5 28410925 28415389 Pvu11g1761 11 44038252 44048824 ECH
Pvu11g1348 11 29132470 29135811 Pvu11g1761 11 44038252 44048824 ECH
Pvu11g1761 11 44038252 44048824 Pvu6g1826 6 28644997 28651046 ECH
Pvu11g1761 11 44038252 44048824 Pvu11g1348 11 29132470 29135811 ECH
Pvu11g1761 11 44038252 44048824 Pvu11g1761 11 44038252 44048824 ECH