Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1758 ATGACAGAGGTAGTTCCTAGAACTGAAGAGGCTGCTGAACCTCCAGCATCACCTCAAACATCTCCTGATGTGCCACATAATATGGAAACAGAACAATTCACTCCTACAAAGTATTCTATTATCAGTAGGAATGGGGTTGGGACCACAGGAAAACACATATCTTTACTTGTGAATCATTTCAAAGTTTCTGTCAATGCTCCAGACACAGTGTTTTTCCAGTATAGTGTTGCTATTACTTTAGAAGATAAGCGAGCAGTTGAAAGCAAGGGCATTGGGAGAAAAGTGATTGATAGGCTTTACCAAATATACTCTTCTGAACTTGGTGGCAAAAGGTTTACCCATGATGGAGGGAAAACTTTGTACACAACGGGTCCTCTGCCACTAAATAAGTATGAGTTCAAAGTGTTTTTGGAGGAATCGTTTAGAAAACGTAGTGCTGGTGCGGATGGAAGTCTTCGTGAGGAAACTAAACGGTCAAAAAATTCTTTTCAGTCAAAGACATTCACGGTGGAGATAAGTTTTGCTGCTAAAATACCCATGCAGTCCATTGCTGTTGCTCCGAAAGAGGTTGACTCAGATGCGTTGAGAGTGCTTGATACTGTACTGAGGCAGCGTGCAGCTGACTGTGGATGTCTTTTAGTAAGGCAGTCTTTTTTTCATGATGACCCAAGAAATTTCACTGATGTTGGGGCTGGTGTAACAGCAGTCTCGGGTTTTCATTCGAGTTTTCATCCCACACAGCGAGGATTGACTCTCAATATGGACGTGTCAACAACTATGATCATAAAACCTGGTCCTGTAATTGATTTTCTGTTATCAAATCAGCAAGTGAGGGAATCCCGTTATATTGACTGGGAAAAGGCCAAAAAAGTGCTTAAAAATTTAAGGGTGCAAGCAACTCATCGAAACTTGGAATTTAAAATTTCTGGCTTGAGTGAGAAACCATGCATTCAGCAACTTTTTAGTATGAAGGTTAAAAATGACAACGGCAATAATGAAGGACAGACGGTGGAGATTACTGTATATGAATATTTTGCCAAACATTGTGGCATTGATCTGACCACATCTGCCTATCTTCCATGTCTTGATGTTGGAAAACCAAAACGGCCCAACTATCTTCCTTTGGAGTTATGTTCACTTGTGTCCCTCCAACGCTATACAAAGGTACTCTCTCCGATGCAAAGAGCATCTTTAGTTGAGAAATCACGCCAAAAGCCTCAAGATAGAATCAAAATTCTGAAACATGCTGTAGGAAACTATTGCTACGATGATGATCCTGTTCTTGCTGCATGTGGAATTTCTGTTGAGAAAGAATTTGCTCTTGTTGAAGGTCGTGTTCTTGAGGCACCAAAGTTGAAGGTTGGTAAGAATGATGTTTGCATCCCATGTAATGGAAGGTGGAATTTTAATAAGAAGACACTTCTACAACCATCGCATATTGATTATTGGGCTGTTGTCAACTTTTCTGCAAGATGTGATACTAGTTACATATCAAGGGAGCTGATCAGATGTGGAATGAGCAAGGGCATTAACATTGAACGGCCGTACTCTTTGATAGAGGAGGAACCACAGTTGAGAAAGTCTAACCCTGTTGCAAGGGTTGAAAGAATGTTTGACCTGCTGAAGTCAAAACTAAATAAAGAACCAAAGTTGATTCTTTGTGTGTTGCCAGAGAGGAAAAATTGTGATATATATGGGCCTTGGAAAAAGAAGTGTCTGAGTGAAATTGGGGTTGTCACACAGTGCATTTCCCCTGTCAAGATCACTGATCAATACCTTAATAATGTACTTCTTAAAATCAATTCCAAGCTGGGAGGAATAAATTCTCTGTTGGCAGTGGAGCATTCTGGCCATCTTCCCCTTATTGAAGATACCCCAACAATGATTTTGGGGATGGATGTCTCTCACAGAGGTCAATTAGATATTCCATCAGTTGCAGCTGTTGTTGGATCTCGATGTTGGCCACTGATTTCAAGGTATAGAGCGTCTGTGAGAATGCAGCCATCTAAGGTGGAGATGATTGATGCTCTATACAAGCCACTGGAAAATGGGGGTGACGATGGTATTATCAGGGAATTGCTTCTAGATTTCTATGATTCAAGTAACGGCCGCAAGCCAACTCAATTTATTGTCTTCAGGGATGGAGTTAGTGAATCACAATTTAATCAGGTTTTGACAGTCGAGCTCAACCAGATAATCAAGGCCTATCAACGTCTTGGTGAGGATGATGTTCCCAAGTTCACCGTGATAGTGGCACAGAAAAATCATCATACTAGGCTGTTTCAGGCTAATGGTCCTGAAAATGTTCCTCCTGGGACTGTCGTGGACACAACAATCACGCATCCAAGTAATTATGATTTTTACATGTGTGCTCATGCGGGGATGCTGGGAACATCTAGGCCTGTACATTATCATGTGCTACTTGATGAGATTGGTTTCTCCGCAGATGGCTTACAAAATTTGATCCATTCGCTGTCCTATGTGAACCAAAGAAGCACAACTGCAACCTCAGTTGTGGCACCAATATGCTATGCGCACCATGCTGCGGCTCAGATAGGACGGTTTTTGAATCTTGATGATTTATCAGAAACGGGCTTAAGTTCCATCCCAGAGCTTCCTAGATTGCATAAGAATATCAGGAGTTCCATGTTCTTCTGTTGA 2661 0.4145 MTEVVPRTEEAAEPPASPQTSPDVPHNMETEQFTPTKYSIISRNGVGTTGKHISLLVNHFKVSVNAPDTVFFQYSVAITLEDKRAVESKGIGRKVIDRLYQIYSSELGGKRFTHDGGKTLYTTGPLPLNKYEFKVFLEESFRKRSAGADGSLREETKRSKNSFQSKTFTVEISFAAKIPMQSIAVAPKEVDSDALRVLDTVLRQRAADCGCLLVRQSFFHDDPRNFTDVGAGVTAVSGFHSSFHPTQRGLTLNMDVSTTMIIKPGPVIDFLLSNQQVRESRYIDWEKAKKVLKNLRVQATHRNLEFKISGLSEKPCIQQLFSMKVKNDNGNNEGQTVEITVYEYFAKHCGIDLTTSAYLPCLDVGKPKRPNYLPLELCSLVSLQRYTKVLSPMQRASLVEKSRQKPQDRIKILKHAVGNYCYDDDPVLAACGISVEKEFALVEGRVLEAPKLKVGKNDVCIPCNGRWNFNKKTLLQPSHIDYWAVVNFSARCDTSYISRELIRCGMSKGINIERPYSLIEEEPQLRKSNPVARVERMFDLLKSKLNKEPKLILCVLPERKNCDIYGPWKKKCLSEIGVVTQCISPVKITDQYLNNVLLKINSKLGGINSLLAVEHSGHLPLIEDTPTMILGMDVSHRGQLDIPSVAAVVGSRCWPLISRYRASVRMQPSKVEMIDALYKPLENGGDDGIIRELLLDFYDSSNGRKPTQFIVFRDGVSESQFNQVLTVELNQIIKAYQRLGEDDVPKFTVIVAQKNHHTRLFQANGPENVPPGTVVDTTITHPSNYDFYMCAHAGMLGTSRPVHYHVLLDEIGFSADGLQNLIHSLSYVNQRSTTATSVVAPICYAHHAAAQIGRFLNLDDLSETGLSSIPELPRLHKNIRSSMFFC* 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1758 886 Pfam N-terminal domain of argonaute 51 202 IPR032474 -
Pvu11g1758 886 PANTHER PROTEIN ARGONAUTE 6 33 885 - -
Pvu11g1758 886 Pfam Piwi domain 551 856 IPR003165 GO:0003676
Pvu11g1758 886 Gene3D paz domain 258 386 - -
Pvu11g1758 886 Gene3D - 618 886 IPR036397 GO:0003676
Pvu11g1758 886 SMART PAZ_2_a_3 265 399 IPR003100 GO:0005515
Pvu11g1758 886 CDD Piwi_ago-like 426 851 IPR045246 -
Pvu11g1758 886 CDD PAZ_argonaute_like 264 381 - -
Pvu11g1758 886 Pfam Argonaute linker 2 domain 411 453 IPR032472 -
Pvu11g1758 886 Gene3D - 446 612 - -
Pvu11g1758 886 SMART DUF1785_2 212 264 IPR014811 -
Pvu11g1758 886 SMART Piwi_a_2 551 857 IPR003165 GO:0003676
Pvu11g1758 886 Pfam PAZ domain 268 398 IPR003100 GO:0005515
Pvu11g1758 886 ProSiteProfiles PAZ domain profile. 289 382 IPR003100 GO:0005515
Pvu11g1758 886 Pfam Argonaute linker 1 domain 214 263 IPR014811 -
Pvu11g1758 886 SUPERFAMILY PAZ domain 259 421 IPR036085 GO:0005515
Pvu11g1758 886 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 33 885 - -
Pvu11g1758 886 SUPERFAMILY Ribonuclease H-like 535 855 IPR012337 -
Pvu11g1758 886 MobiDBLite consensus disorder prediction 1 29 - -
Pvu11g1758 886 ProSiteProfiles Piwi domain profile. 551 857 IPR003165 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1758 Pvu-Chr11 44005938 44015983 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1758 43 886 Eukaryotic Initiation Factors Gene Family AT5G43810 36.120 5.04e-157 484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1758 11 44005938 44015983 Pvu11g1758 11 44005938 44015983 ECH